RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 TMIGD2Q96BF3 282 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 COQ8BQ96D53 544 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 DOHHQ9BU89 302 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 EVA1BQ9NVM1 165 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 B4GAT1O43505 415 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 GABRA3P34903 492 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 BICRALQ6AI39 1079 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 OR56A1Q8NGH5 318 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 C1orf216Q8TAB5 229 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 MED28Q9H204 178 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 POLE4Q9NR33 117 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 PDHA2P29803 388 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 CCR7P32248 378 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 STT3AP46977 705 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 NXPE4Q6UWF7 544 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 TRIM73Q86UV7 250 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 NAGSQ8N159 534 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 ZFP41Q8N8Y5 198 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 LRIG1Q96JA1 1093 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 PTCHD1Q96NR3 888 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 NDC1Q9BTX1 674 aa13.62□□□□□ -0.23
GABRB3-219ENST00000636466 CABIN1Q9Y6J0 2220 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 PRAMEF33A0A0G2JMD5 474 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 PRAMEF10O60809 474 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 CD2P06729 351 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 PTGES3Q15185 160 aaKnown RBP13.61□□□□□ -0.23
GABRB3-219ENST00000636466 EOGTQ5NDL2 527 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 SNX29P2Q8IUI4 249 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 FOXJ1Q92949 421 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 MAPKAP1Q9BPZ7 522 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 RTP3Q9BQQ7 232 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 KLF16Q9BXK1 252 aaPredicted RBP13.61□□□□□ -0.23
GABRB3-219ENST00000636466 TAS2R7Q9NYW3 318 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 MARK1Q9P0L2 795 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 ARID1AO14497 2285 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 GABBR2O75899 941 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 LIPKQ5VXJ0 399 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 ADNP2Q6IQ32 1131 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 PGBD5Q8N414 524 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 THEM6Q8WUY1 208 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 PMM1Q92871 262 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 YTHDF1Q9BYJ9 559 aaKnown RBP13.61□□□□□ -0.23
GABRB3-219ENST00000636466 TRIM2Q9C040 744 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 OR51I1Q9H343 314 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 SMAD9O15198 467 aaKnown RBP13.61□□□□□ -0.23
GABRB3-219ENST00000636466 AKAP8O43823 692 aaKnown RBP13.61□□□□□ -0.23
GABRB3-219ENST00000636466 SDC3O75056 442 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 MPC1LP0DKB6 136 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 SGSHP51688 502 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 KCNC3Q14003 757 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 ANKDD1AQ495B1 522 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 PLA2G15Q8NCC3 412 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 NUP43Q8NFH3 380 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 SLC12A9Q9BXP2 914 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 SPTBN2O15020 2390 aa13.61□□□□□ -0.23
GABRB3-219ENST00000636466 LOC285095A0A1B0GVY8 99 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ANHXE9PGG2 379 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 EIF1AYO14602 144 aaKnown RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ZNF821O75541 412 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ITGBL1O95965 494 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 HOXD9P28356 352 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 TSPAN5P62079 268 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 MEX3DQ86XN8 651 aaKnown RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 NEIL2Q969S2 332 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 WDR92Q96MX6 357 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 MCCC1Q96RQ3 725 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 BHLHE41Q9C0J9 482 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 DRGXA6NNA5 263 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 CAPN14A8MX76 684 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 SCDO00767 359 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 FRS3O43559 492 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 RASAL1O95294 804 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ZNF3P17036 446 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 GSTM3P21266 225 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 SHMT2P34897 504 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 SOX2P48431 317 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 CLDN2P57739 230 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 TAZQ16635 292 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 SLC22A16Q86VW1 577 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 SLC30A8Q8IWU4 369 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 C9orf43Q8TAL5 461 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 COMMD4Q9H0A8 199 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 EBF1Q9UH73 591 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 USP22Q9UPT9 525 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 M0R129 80 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ADH1BP00325 375 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 TIMP1P01033 207 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ATXN1LP0C7T5 689 aaKnown RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 CEBPBP17676 345 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 UQCRC2P22695 453 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 GRIA2P42262 883 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 ZNF140P52738 457 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 GBX2P52951 348 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-219ENST00000636466 NPRL3Q12980 569 aa13.6□□□□□ -0.23
GABRB3-219ENST00000636466 EIF4HQ15056 248 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms