RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 GUCY2DQ02846 1103 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CACNG1Q06432 222 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SULT2A1Q06520 285 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 FCHO2Q0JRZ9 810 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ELAVL2Q12926 359 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ABRQ12979 859 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CALCOCO2Q13137 446 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 EFTUD2Q15029 972 aaKnown RBP eCLIP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 EXT1Q16394 746 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CTU2Q2VPK5 515 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 MOGAT2Q3SYC2 334 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CRY2Q49AN0 593 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GPR33Q49SQ1 333 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PDLIM3Q53GG5 364 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 HSP90AB3PQ58FF7 597 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF542PQ5EBM4 170 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ZRANB3Q5FWF4 1079 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TCP11X2Q5H9J9 407 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 KRBOX4Q5JUW0 171 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.93□□□□□ -2.266e-15■□□□□ 9.2
SMARCB1-209ENST00000635578 SPOUT1Q5T280 376 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 OR4C11Q6IEV9 310 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PRR27Q6MZM9 219 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PAQR6Q6TCH4 344 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM198BQ6UWH4 519 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CDHR3Q6ZTQ4 885 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM47EQ6ZV65 393 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GPRIN3Q6ZVF9 776 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 FCRLAQ7L513 359 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NRARPQ7Z6K4 114 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PCGF5Q86SE9 256 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PHLDB2Q86SQ0 1253 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CATSPER3Q86XQ3 398 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF584Q8IVC4 421 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PI4KAP1Q8N8J0 262 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 Q8NBF4 154 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 OR5T2Q8NGG2 359 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 OR4D10Q8NGI6 311 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 KIF18AQ8NI77 898 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PIK3R3Q92569 461 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NSMAFQ92636 917 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RASL10AQ92737 203 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 EXT2Q93063 718 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CNRIP1Q96F85 164 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 BSCL2Q96G97 398 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF274Q96GC6 653 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RADILQ96JH8 1075 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 C2orf48Q96LS8 159 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RMDN2Q96LZ7 410 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 AK8Q96MA6 479 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 KLHL5Q96PQ7 755 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NEDD4LQ96PU5 975 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 KRT12Q99456 494 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CDCA3Q99618 268 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 IL12RB2Q99665 862 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RBM4BQ9BQ04 359 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SOSTQ9BQB4 213 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GPATCH1Q9BRR8 931 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NAA11Q9BSU3 229 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 AP1M1Q9BXS5 423 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TXLNGYQ9BZA5 131 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GPR88Q9GZN0 384 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ANKRD2Q9GZV1 360 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 THAP2Q9H0W7 228 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 MTIF3Q9H2K0 278 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SP140LQ9H930 580 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 MED20Q9H944 212 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PANK3Q9H999 370 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 KCNK13Q9HB14 408 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 DNAJC4Q9NNZ3 241 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 UBE2TQ9NPD8 197 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF701Q9NV72 531 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TBC1D13Q9NVG8 400 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NLGN3Q9NZ94 848 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 POLKQ9UBT6 870 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NARFQ9UHQ1 456 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PRDM4Q9UKN5 801 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SNX7Q9UNH6 387 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 NIP7Q9Y221 180 aaKnown RBP eCLIP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SCN8AQ9UQD0 1980 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CUL9Q8IWT3 2517 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RFX7Q2KHR2 1363 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 KIF24Q5T7B8 1368 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 IBTKQ9P2D0 1353 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SCN1AP35498 2009 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 SNRNP200O75643 2136 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 EYSQ5T1H1 3165 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 MYO18AQ92614 2054 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TRAV24A0A0B4J272 114 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TRBV5-5A0A0J9YX44 114 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 A0A1W2PPM1 405 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 FEZF1A0PJY2 475 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 CASTOR2A6NHX0 329 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 C17orf105B2RV13 164 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 TMEM150CB9EJG8 249 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 F8VVB4 439 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 F8VWA3 439 aa0.92□□□□□ -2.26
SMARCB1-209ENST00000635578 H3BMM5 538 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms