RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 UGT8Q16880 541 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 ANXA8L1Q5VT79 327 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 ZDHHC20Q5W0Z9 365 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 XKRXQ6PP77 449 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 TMEM80Q96HE8 168 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 LYSMD1Q96S90 227 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 BTNL2Q9UIR0 455 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 POFUT2Q9Y2G5 429 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
CHD1L-210ENST00000622533 A8MVJ9 347 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 SCN2BO60939 215 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 SLC22A5O76082 557 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ACADMP11310 421 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ICAM2P13598 275 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 AOAHP28039 575 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 POU1F1P28069 291 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 CRYBB2P43320 205 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ASMTP46597 345 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 MAP2K3P46734 347 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 SLC11A1P49279 550 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 CRYBA2P53672 197 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 KCNJ10P78508 379 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 KCNC3Q14003 757 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ZBTB37Q5TC79 503 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 PLEKHM3Q6ZWE6 761 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 DENND6BQ8NEG7 585 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 C9orf43Q8TAL5 461 aaPredicted RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 UPRTQ96BW1 309 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 IL4I1Q96RQ9 567 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 DOHHQ9BU89 302 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 GTPBP2Q9BX10 602 aaKnown RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ZNF224Q9NZL3 707 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ENOPH1Q9UHY7 261 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 KPNA5O15131 536 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 HSD3B1P14060 373 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 DDCP20711 480 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 HSD3B2P26439 372 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 PCGF2P35227 344 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 CSKP41240 450 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 CDH12P55289 794 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 CAV3P56539 151 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 WNT3P56703 355 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 MRPL28Q13084 256 aaKnown RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ELOAQ14241 798 aaKnown RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 SUZ12Q15022 739 aaKnown RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 WSCD2Q2TBF2 565 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 TIGD3Q6B0B8 471 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 TSEN54Q7Z6J9 526 aaKnown RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ADGRG2Q8IZP9 1017 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 SLC34A3Q8N130 599 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ASB11Q8WXH4 323 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 ZBED6CLQ96FA7 236 aaPredicted RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 TMEM175Q9BSA9 504 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 TM6SF2Q9BZW4 377 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 VPS29Q9UBQ0 182 aa12.47□□□□□ -0.41
CHD1L-210ENST00000622533 AFF4Q9UHB7 1163 aaKnown RBP12.47□□□□□ -0.41
CHD1L-210ENST00000622533 XIRP2A4UGR9 3374 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 LOC102723532A0A0G2JNH3 316 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 MYL12BO14950 172 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 LRRTM2O43300 516 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 PLOD3O60568 738 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 PDE9AO76083 593 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 IGSF6O95976 241 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 SRCP12931 536 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 MYL12AP19105 171 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 SERPINA4P29622 427 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 TAF12Q16514 161 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 PLEKHS1Q5SXH7 462 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 SLC8B1Q6J4K2 584 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 PAQR6Q6TCH4 344 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 WDFY2Q96P53 400 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 QRFPRQ96P65 431 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 DCLRE1CQ96SD1 692 aaKnown RBP12.46□□□□□ -0.41
CHD1L-210ENST00000622533 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 SCN8AQ9UQD0 1980 aa12.46□□□□□ -0.41
CHD1L-210ENST00000622533 SLC35F4A4IF30 521 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.42
CHD1L-210ENST00000622533 CCR7P32248 378 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 SPIBQ01892 262 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 MAB21L1Q13394 359 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 EXOC3L2Q2M3D2 409 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 LCN1P1Q5VSP4 162 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 LIPKQ5VXJ0 399 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 PLAG1Q6DJT9 500 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 CLECL1Q8IZS7 167 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 LGI4Q8N135 537 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 C11orf65Q8NCR3 313 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 CDC26Q8NHZ8 85 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 SKA2Q8WVK7 121 aaPredicted RBP12.46□□□□□ -0.42
CHD1L-210ENST00000622533 ALG14Q96F25 216 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 CASD1Q96PB1 797 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 DUSP26Q9BV47 211 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 NMRK2Q9NPI5 230 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 FZD4Q9ULV1 537 aa12.46□□□□□ -0.42
CHD1L-210ENST00000622533 FAM240BA0A1B0GVZ2 78 aa12.45□□□□□ -0.42
CHD1L-210ENST00000622533 FABP7O15540 132 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms