RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 MRPL53Q96EL3 112 aaKnown RBP4.21□□□□□ -1.74
CPNE3-213ENST00000622183 KCNK16Q96T55 309 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 OVOL2Q9BRP0 275 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 ZNF696Q9H7X3 374 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 FGF22Q9HCT0 170 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 PLCXD1Q9NUJ7 323 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 TECRQ9NZ01 308 aaKnown RBP4.21□□□□□ -1.74
CPNE3-213ENST00000622183 NDUFA13Q9P0J0 144 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 ACTR3BQ9P1U1 418 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 PLEKHA6Q9Y2H5 1048 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 A0A087X002 238 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 ANHXE9PGG2 379 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 EEF2KO00418 725 aaKnown RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CHEK1O14757 476 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 RASGRF2O14827 1237 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 ZFAND5O76080 213 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 NXPH2O95156 264 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 OR6A2O95222 327 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CLDN1O95832 211 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 TGFAP01135 160 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 RPLP0P05388 317 aaKnown RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 PTMAP06454 111 aaKnown RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CFC1P0CG37 223 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 TPBGLP0DKB5 382 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 KRT5P13647 590 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 GPX3P22352 226 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 GLRA1P23415 457 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 MARCKSP29966 332 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 MMP12P39900 470 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 ALDH3B1P43353 468 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 KRTAP24-1Q3LI83 254 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 TMEM30BQ3MIR4 351 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 RFTN2Q52LD8 501 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 MPPE1Q53F39 396 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 WLSQ5T9L3 541 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CES4AQ5XG92 561 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 ARHGAP11AQ6P4F7 1023 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CATSPER4Q7RTX7 472 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 LEMD2Q8NC56 503 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 RPLP0P6Q8NHW5 317 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 ESAMQ96AP7 390 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 TBC1D31Q96DN5 1066 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 CXorf58Q96LI9 332 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 SAMD8Q96LT4 415 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 DUX3Q96PT4 197 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 FTHL17Q9BXU8 183 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 WWP1Q9H0M0 922 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 SIRPDQ9H106 197 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 MED20Q9H944 212 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 HOMER3Q9NSC5 361 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 MED17Q9NVC6 651 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 HPF1Q9NWY4 346 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 KLK11Q9UBX7 282 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 MRTO4Q9UKD2 239 aaKnown RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 ISY1Q9ULR0 285 aaKnown RBP4.2□□□□□ -1.74
CPNE3-213ENST00000622183 GAB2Q9UQC2 676 aa4.2□□□□□ -1.74
CPNE3-213ENST00000622183 SHISA7A6NL88 538 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 B4GAT1O43505 415 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 SSX5O60225 188 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 CSDE1O75534 798 aaKnown RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 MTRF1O75570 445 aaKnown RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 OR6B1O95007 311 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 IGLV1-44P01699 117 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 ZNF26P17031 533 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 ARF4P18085 180 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 RPA1P27694 616 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 ASMTP46597 345 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 FHITP49789 147 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 WSCD2Q2TBF2 565 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 TAF1BQ53T94 588 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 KIF6Q6ZMV9 814 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 FRRS1Q6ZNA5 592 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 CDHR3Q6ZTQ4 885 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 Q71RC1 249 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 OR9Q2Q8NGE9 314 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 GOLGA5Q8TBA6 731 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 MRPL38Q96DV4 380 aaKnown RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 C14orf79Q96F83 325 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 RPGRIP1Q96KN7 1286 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 TAAR6Q96RI8 345 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 RBM4Q9BWF3 364 aaKnown RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 FUNDC2Q9BWH2 189 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 DGCR6LQ9BY27 220 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 ATG10Q9H0Y0 220 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 SLC26A1Q9H2B4 701 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 FAM212BQ9NTI7 297 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 COPS7AQ9UBW8 275 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 DIMT1Q9UNQ2 313 aaKnown RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 MRPS28Q9Y2Q9 187 aaKnown RBP4.19□□□□□ -1.74
CPNE3-213ENST00000622183 WIPI2Q9Y4P8 454 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 CLCA3PQ9Y6N3 262 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 ZHX2Q9Y6X8 837 aa4.19□□□□□ -1.74
CPNE3-213ENST00000622183 SMCHD1A6NHR9 2005 aa4.18□□□□□ -1.74
CPNE3-213ENST00000622183 A0A087WYN8 130 aa4.18□□□□□ -1.74
CPNE3-213ENST00000622183 A0A0U1RRA0 63 aa4.18□□□□□ -1.74
CPNE3-213ENST00000622183 IQCMA0A1B0GVH7 501 aa4.18□□□□□ -1.74
CPNE3-213ENST00000622183 PRR23AA6NEV1 266 aa4.18□□□□□ -1.74
CPNE3-213ENST00000622183 A8MU76 341 aa4.18□□□□□ -1.74
CPNE3-213ENST00000622183 K7EQD1 137 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms