RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CCNOP22674 350 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 ACSL1P33121 698 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 SLC9A3P48764 834 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 DNASE1L1P49184 302 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 ZNF140P52738 457 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 MC1RQ01726 317 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 WSCD2Q2TBF2 565 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 FAM109BQ6ICB4 259 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 OR5K1Q8NHB7 308 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 TMEM174Q8WUU8 243 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 FBXL8Q96CD0 374 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 HSH2DQ96JZ2 352 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 HIST1H2AAQ96QV6 131 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 TRIB3Q96RU7 358 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 CHCHD6Q9BRQ6 235 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 MRPL39Q9NYK5 338 aaKnown RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 DAPK2Q9UIK4 370 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 PCTPQ9UKL6 214 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 RIMKLBQ9ULI2 386 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 SPATA2Q9UM82 520 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 IRGMA1A4Y4 181 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 IL33O95760 270 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 AOC1P19801 751 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PRKACGP22612 351 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 MAZP56270 477 aaKnown RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 PPP2R2BQ00005 443 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 MXD1Q05195 221 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 CYBRD1Q53TN4 286 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 NDUFAF5Q5TEU4 345 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PEG10Q86TG7 708 aaKnown RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 PDZD3Q86UT5 571 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 EGFL6Q8IUX8 553 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 SVOPLQ8N434 492 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PROKR2Q8NFJ6 384 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 RHBDF1Q96CC6 855 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 NODALQ96S42 347 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 C11orf98E9PRG8 122 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 LINC01565O15544 149 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 CDC40O60508 579 aaKnown RBP eCLIP8.84□□□□□ -0.99
GGA3-223ENST00000621870 RDH16O75452 317 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ACVR2AP27037 513 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 NUP62P37198 522 aaPredicted RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 NUDT6P53370 316 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 EMP2P54851 167 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 MYBPC3Q14896 1274 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 CHST4Q8NCG5 386 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 OR51A7Q8NH64 312 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 COQ8BQ96D53 544 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 CD180Q99467 661 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 COPS4Q9BT78 406 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 TSSK6Q9BXA6 273 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 C8orf4Q9NR00 106 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ABCB10Q9NRK6 738 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 TAAR2Q9P1P5 351 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PLCL2Q9UPR0 1127 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PRSS21Q9Y6M0 314 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 GPR179Q6PRD1 2367 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 AQP9O43315 295 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 EMC8O43402 210 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 AKAP8O43823 692 aaKnown RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 RPS3P23396 243 aaKnown RBP eCLIP8.84□□□□□ -0.99
GGA3-223ENST00000621870 PSMB5P28074 263 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 AFF3P51826 1226 aaKnown RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 ARSFP54793 590 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 COLEC12Q5KU26 742 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PDSS1Q5T2R2 415 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 MANEALQ5VSG8 457 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 KIAA0895LQ68EN5 471 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 OR4C11Q6IEV9 310 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 C1orf94Q6P1W5 598 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 SPATC1Q76KD6 591 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 TREML1Q86YW5 311 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 PGBD5Q8N414 524 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ZNF676Q8N7Q3 588 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 MAFAQ8NHW3 353 aaPredicted RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 ZNF480Q8WV37 535 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 WBP2Q969T9 261 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 TMBIM1Q969X1 311 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 DUSP23Q9BVJ7 150 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 SPATA9Q9BWV2 254 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 KCNK13Q9HB14 408 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ABCB9Q9NP78 766 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 FARSBQ9NSD9 589 aaKnown RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 RHBDL2Q9NX52 303 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ETAA1Q9NY74 926 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 OR6C2Q9NZP2 312 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 ACTR3BQ9P1U1 418 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 THAP10Q9P2Z0 257 aaPredicted RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 BTBD3Q9Y2F9 522 aa8.84□□□□□ -0.99
GGA3-223ENST00000621870 SPIN1Q9Y657 262 aaPredicted RBP8.84□□□□□ -0.99
GGA3-223ENST00000621870 A0A075B6Q4 140 aa8.83□□□□□ -1
GGA3-223ENST00000621870 PRRT4C9JH25 899 aa8.83□□□□□ -1
GGA3-223ENST00000621870 NPIPA5E9PKD4 350 aa8.83□□□□□ -1
GGA3-223ENST00000621870 PSMD9O00233 223 aa8.83□□□□□ -1
GGA3-223ENST00000621870 HAT1O14929 419 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms