RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 TRIM45Q9H8W5 580 aaPredicted RBP18.37■□□□□ 0.53
PTBP1-219ENST00000621737 DMRT3Q9NQL9 472 aa18.37■□□□□ 0.53
PTBP1-219ENST00000621737 SEC14L3Q9UDX4 400 aa18.37■□□□□ 0.53
PTBP1-219ENST00000621737 TMCO1Q9UM00 188 aa18.37■□□□□ 0.53
PTBP1-219ENST00000621737 PCDHGA11Q9Y5H2 935 aa18.37■□□□□ 0.53
PTBP1-219ENST00000621737 ASPDHA6ND91 283 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 POC1B-GALNT4F8VUJ3 575 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 H0YIV9 168 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 SAP18O00422 153 aaKnown RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 SH3BGRLO75368 114 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 SLC25A12O75746 678 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 UNC5CO95185 931 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 SIX3O95343 332 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 SP1P08047 785 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 COL6A2P12110 1019 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 CYB561P49447 251 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 HLCSP50747 726 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 GPR143P51810 404 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 RAP1GDS1P52306 607 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 PHEXP78562 749 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 SLC25A25Q6KCM7 469 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 MAMDC2Q7Z304 686 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 TMEM132CQ8N3T6 1108 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 PTGR2Q8N8N7 351 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 UHMK1Q8TAS1 419 aaKnown RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 NCLNQ969V3 563 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 MTERF1Q99551 399 aaKnown RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 OR51B5Q9H339 312 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 IPPKQ9H8X2 491 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 ZNF358Q9NW07 568 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 ZNF223Q9UK11 482 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-219ENST00000621737 NBPF19A0A087WUL8 3843 aa18.36■□□□□ 0.53
PTBP1-219ENST00000621737 A0A1B0GUH1 482 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 NME2P1O60361 137 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 IFNA16P05015 189 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 ABHD2P08910 425 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 NME2P22392 152 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 ARFIP1P53367 373 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 STX4Q12846 297 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 SERTAD2Q14140 314 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 OR4C11Q6IEV9 310 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 GALNTL5Q7Z4T8 443 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 IFT20Q8IY31 132 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 RNF175Q8N4F7 328 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 L3MBTL4Q8NA19 623 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 FAM98AQ8NCA5 519 aaKnown RBP18.35■□□□□ 0.53
PTBP1-219ENST00000621737 DAZLQ92904 295 aaKnown RBP18.35■□□□□ 0.53
PTBP1-219ENST00000621737 RGMAQ96B86 450 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 FRMD6Q96NE9 622 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 CCDC77Q9BR77 488 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 XPR1Q9UBH6 696 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 VTI1BQ9UEU0 232 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 FBXW2Q9UKT8 454 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 NFU1Q9UMS0 254 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 CLCA3PQ9Y6N3 262 aa18.35■□□□□ 0.53
PTBP1-219ENST00000621737 EXOC1LA0A1B0GW35 172 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 TRIM49D1C9J1S8 452 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 STX16-NPEPL1H3BU86 382 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 PLPP1O14494 284 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 STX16O14662 325 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 SMIM24O75264 130 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 MLYCDO95822 493 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 CPN2P22792 545 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 SRSF11Q05519 484 aaKnown RBP18.34■□□□□ 0.53
PTBP1-219ENST00000621737 ZNF227Q86WZ6 799 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 ZCCHC7Q8N3Z6 543 aaKnown RBP18.34■□□□□ 0.53
PTBP1-219ENST00000621737 MORN4Q8NDC4 146 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 C7orf57Q8NEG2 295 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 OR14A16Q8NHC5 309 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 THAP3Q8WTV1 239 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-219ENST00000621737 TMEM125Q96AQ2 219 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 SCYL1Q96KG9 808 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 SORBS1Q9BX66 1292 aaKnown RBP18.34■□□□□ 0.53
PTBP1-219ENST00000621737 ALOXE3Q9BYJ1 711 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 MS4A12Q9NXJ0 267 aa18.34■□□□□ 0.53
PTBP1-219ENST00000621737 DIDO1Q9BTC0 2240 aaKnown RBP18.33■□□□□ 0.53
PTBP1-219ENST00000621737 LDB3O75112 727 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 ITGA10O75578 1167 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 ZFAND5O76080 213 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 CLDN9O95484 217 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 CLDN1O95832 211 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 PTX3P26022 381 aaPredicted RBP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 RPS13P62277 151 aaKnown RBP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 RBPJQ06330 500 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 SLAMF1Q13291 335 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 CUL3Q13618 768 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 CPSF6Q16630 551 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 MAPKAPK3Q16644 382 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 C1QL3Q5VWW1 255 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 HIST2H2BCQ6DN03 193 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 TRMT10CQ7L0Y3 403 aaKnown RBP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 WDR20Q8TBZ3 569 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 PTPMT1Q8WUK0 201 aaPredicted RBP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 RELTQ969Z4 430 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 PHF21BQ96EK2 531 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 NOL11Q9H8H0 719 aaKnown RBP18.33■□□□□ 0.52
PTBP1-219ENST00000621737 PHF11Q9UIL8 331 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 PCTPQ9UKL6 214 aa18.33■□□□□ 0.52
PTBP1-219ENST00000621737 RNF11Q9Y3C5 154 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms