RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 IKBIPQ70UQ0 350 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 ZNF551Q7Z340 670 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 DHFR2Q86XF0 187 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 PLD3Q8IV08 490 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 LILRA2Q8N149 483 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 C10orf111Q8N326 155 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 ZNF548Q8NEK5 533 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 SLC37A2Q8TED4 501 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 F2RL3Q96RI0 385 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 DPH7Q9BTV6 452 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 REEP4Q9H6H4 257 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 KAT8Q9H7Z6 458 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 ERVMER34-1Q9H9K5 563 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 CPNE7Q9UBL6 633 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 BTNL2Q9UIR0 455 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 RIMS3Q9UJD0 308 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 ADAM29Q9UKF5 820 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 WBP11Q9Y2W2 641 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 LRRC42Q9Y546 428 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 AP1M2Q9Y6Q5 423 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 LOC400499M0QZD8 3231 aa11.8□□□□□ -0.52
TNFAIP3-211ENST00000621150 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 OR2A25A4D2G3 310 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 LRIT2A6NDA9 550 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 OR1F1O43749 312 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 KLK1P06870 262 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 ZCCHC18P0CG32 403 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 COX7A2P14406 83 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 CMPK1P30085 196 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 VHLP40337 213 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 GRIA3P42263 894 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 RXRGP48443 463 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 ARRB1P49407 418 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 ARFIP1P53367 373 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 CYP4F2P78329 520 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 PLIN5Q00G26 463 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 CYP4F3Q08477 520 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 BNIP3Q12983 259 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 PGS1Q32NB8 556 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 MRM1Q6IN84 353 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 PPP4R4Q6NUP7 873 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 C6orf15Q6UXA7 325 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 TMPRSS7Q7RTY8 843 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 ANKRD46Q86W74 232 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 PQLC1Q8N2U9 271 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 GOT1L1Q8NHS2 421 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 SLC22A18Q96BI1 424 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 MTERF3Q96E29 417 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 ZNF764Q96H86 408 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 KCTD14Q9BQ13 255 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 DUSP26Q9BV47 211 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 SORBS1Q9BX66 1292 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 ASPSCR1Q9BZE9 553 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 BHLHE41Q9C0J9 482 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 SRMSQ9H3Y6 488 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 DDX31Q9H8H2 851 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 AHSPQ9NZD4 102 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 C6orf203Q9P0P8 240 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 FTSJ1Q9UET6 329 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 APOBEC3BQ9UH17 382 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 SNX7Q9UNH6 387 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 AP3M1Q9Y2T2 418 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 C15orf41Q9Y2V0 281 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 SNX13Q9Y5W8 968 aa11.79□□□□□ -0.52
TNFAIP3-211ENST00000621150 A0A0A6YYD5 115 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 GNG14A0A1W2PPG7 69 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 C1orf226A1L170 272 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 C4orf51C9J302 202 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 RFXANKO14593 260 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 YKT6O15498 198 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 NDUFS4O43181 175 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 GBAP04062 536 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 EDN3P14138 238 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 EPHA8P29322 1005 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 SLC7A1P30825 629 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 HPCAL1P37235 193 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 SESN3P58005 492 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 TMEM35AQ53FP2 167 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 CPTPQ5TA50 214 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 ANKRD26P1Q6NSI1 321 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 CYP2R1Q6VVX0 501 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 C17orf82Q86X59 251 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 TMEM126BQ8IUX1 230 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 KBTBD2Q8IY47 623 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 DTWD1Q8N5C7 304 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 TMEM102Q8N9M5 508 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 GATAD2BQ8WXI9 593 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 SH3GL1Q99961 368 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 TRIM4Q9C037 500 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 RPF2Q9H7B2 306 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 ARMC1Q9NVT9 282 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 SNRNP200O75643 2136 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 ISM1B1AKI9 464 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 TAF4O00268 1085 aa11.78□□□□□ -0.52
TNFAIP3-211ENST00000621150 RTCAO00442 366 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms