RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 YPEL5P62699 121 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 ABATP80404 500 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SLC5A12Q1EHB4 618 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 LRIT3Q3SXY7 679 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 INTS11Q5TA45 600 aaKnown RBP9.45□□□□□ -0.9
VTA1-205ENST00000620996 ABRAXAS1Q6UWZ7 409 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 IKBIPQ70UQ0 350 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 EID3Q8N140 333 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 TTLQ8NG68 377 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 KLHDC7BQ96G42 594 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 GSDMCQ9BYG8 508 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 OR6C2Q9NZP2 312 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 USP36Q9P275 1121 aaKnown RBP9.45□□□□□ -0.9
VTA1-205ENST00000620996 DNAJB9Q9UBS3 223 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SNX7Q9UNH6 387 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 C5orf58C9J3I9 102 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 CLEC3AO75596 197 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 TNFRSF1BP20333 461 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 BTN3A2P78410 334 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 LRRC74AQ0VAA2 488 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 MERTKQ12866 999 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 SLC9A5Q14940 896 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 NDUFAF5Q5TEU4 345 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 CPZQ66K79 652 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ADHFE1Q8IWW8 467 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 DHRSXQ8N5I4 330 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 SCARF2Q96GP6 870 aaPredicted RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 CXorf36Q9H7Y0 433 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ADPRHL2Q9NX46 363 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 TRPC4Q9UBN4 977 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 C1orf226A1L170 272 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 SUV39H1O43463 412 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 PRAMEF10O60809 474 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 TNFAIP8O95379 198 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 YAP1P46937 504 aaKnown RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 C21orf58P58505 322 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 MYBPC1Q00872 1141 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 SCARB2Q14108 478 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 GAS6Q14393 721 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 IRAK1BP1Q5VVH5 260 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ANKRD34AQ69YU3 496 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 TTC33Q6PID6 262 aaPredicted RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 ZNF793Q6ZN11 406 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 CAMKMTQ7Z624 323 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 UBE3DQ7Z6J8 389 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 KCT2Q8NC54 265 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.44□□□□□ -0.9
VTA1-205ENST00000620996 CREB3L4Q8TEY5 395 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 FAIM2Q9BWQ8 316 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ZNF717Q9BY31 904 aaPredicted RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 TRNAU1APQ9NX07 287 aaKnown RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 WSB2Q9NYS7 404 aaPredicted RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 APOBEC3BQ9UH17 382 aaKnown RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 KLF15Q9UIH9 416 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ABCG2Q9UNQ0 655 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 A0A1B0GTW7 788 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 TNFRSF10CO14798 259 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ACOX3O15254 700 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 KRT75O95678 551 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 FABP3P05413 133 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 HOXC4P09017 264 aaPredicted RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 JUNDP17535 347 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 NCBP2P52298 156 aaKnown RBP eCLIP9.44□□□□□ -0.95e-11■□□□□ 9
VTA1-205ENST00000620996 PDE7AQ13946 482 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 SMAD2Q15796 467 aaKnown RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 ADRM1Q16186 407 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 RBM44Q6ZP01 1051 aaKnown RBP9.44□□□□□ -0.9
VTA1-205ENST00000620996 SYT13Q7L8C5 426 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 NRROSQ86YC3 692 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 PACRGLQ8N7B6 248 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 RAB8BQ92930 207 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 NTN4Q9HB63 628 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 LHX9Q9NQ69 397 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 HRASLS2Q9NWW9 162 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ACTR10Q9NZ32 417 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 CPNE7Q9UBL6 633 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 RAB23Q9ULC3 237 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 HS3ST3A1Q9Y663 406 aa9.44□□□□□ -0.9
VTA1-205ENST00000620996 ZNF860A6NHJ4 632 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 CDK4P11802 303 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 UGT2B7P16662 529 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 RCVRNP35243 200 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 FEN1P39748 380 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 ARSFP54793 590 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 RGS1Q08116 209 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 DAG1Q14118 895 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ZNF750Q32MQ0 723 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 CYBRD1Q53TN4 286 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 NHSL2Q5HYW2 709 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ARMC6Q6NXE6 501 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 CEACAM20Q6UY09 585 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SPRED1Q7Z699 444 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 GALNT5Q7Z7M9 940 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ZBTB46Q86UZ6 589 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 CHERPQ8IWX8 916 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 ACOT4Q8N9L9 421 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SLC37A2Q8TED4 501 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 LZICQ8WZA0 190 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms