RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 HPCAL1P37235 193 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 NOVA1P51513 510 aaKnown RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 MNAT1P51948 309 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DGKQP52824 942 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CLDN6P56747 220 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 KCNK10P57789 538 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PHC1P78364 1004 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 OLR1P78380 273 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PDE7AQ13946 482 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 RCAN2Q14206 197 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TLR1Q15399 786 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ZSCAN26Q16670 478 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DPY19L1Q2PZI1 675 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PGS1Q32NB8 556 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 VPS26BQ4G0F5 336 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SPANXN4Q5MJ08 99 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 NDUFAF5Q5TEU4 345 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 C18orf63Q68DL7 685 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 RHBDD2Q6NTF9 364 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 GK5Q6ZS86 529 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CCDC121Q6ZUS5 278 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 MED25Q71SY5 747 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 RAB11FIP2Q7L804 512 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CAMKMTQ7Z624 323 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TMPRSS12Q86WS5 348 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SNX32Q86XE0 403 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TICAM1Q8IUC6 712 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TMEM126BQ8IUX1 230 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DSELQ8IZU8 1212 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CA13Q8N1Q1 262 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DTWD1Q8N5C7 304 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 NATD1Q8N6N6 113 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 POU5F2Q8N7G0 328 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SLC38A9Q8NBW4 561 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 OR7A2PQ8NGA2 310 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 OR8J2Q8NGG1 315 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 OR5T3Q8NGG3 340 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CDC26Q8NHZ8 85 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 UCN3Q969E3 161 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SPDL1Q96EA4 605 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 MMABQ96EY8 250 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF764Q96H86 408 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SLC45A3Q96JT2 553 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TAAR9Q96RI9 348 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ZPBPQ9BS86 351 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SLC7A5P2Q9GIP4 190 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ACTR5Q9H9F9 607 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 WDR41Q9HAD4 459 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 EFCAB1Q9HAE3 211 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PRDM9Q9NQV7 894 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TEX10Q9NXF1 929 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 EHD3Q9NZN3 535 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SH3BP4Q9P0V3 963 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DHCR7Q9UBM7 475 aaKnown RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 NDOR1Q9UHB4 597 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CES1P1Q9UKY3 287 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PSME2Q9UL46 239 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 NDUFAF1Q9Y375 327 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TMEM184BQ9Y519 407 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SPACA6W5XKT8 324 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 HEATR5BQ9P2D3 2071 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PRSS51A0A1B0GVH4 220 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 A0A1B0GX78 115 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF860A6NHJ4 632 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 WASHC1A8K0Z3 465 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 BBIP1A8MTZ0 92 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 B2RBV5 119 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 FAM227AF5H4B4 570 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 NR5A2O00482 541 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 FBP2O00757 339 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 PLD2O14939 933 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 PGRMC2O15173 223 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 HYAL3O43820 417 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 SCN2BO60939 215 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 RDH16O75452 317 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 TIAF1O95411 115 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 AIFM1O95831 613 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 NTRK1P04629 796 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 RNH1P13489 461 aaKnown RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 COX7A2P14406 83 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 CAPN3P20807 821 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 IL10P22301 178 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 BUD31P41223 144 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 KIR3DL1P43629 444 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 OR1D4P47884 311 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 WNT3P56703 355 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 RAB38P57729 211 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 RAB15P59190 212 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 MAT1AQ00266 395 aaKnown RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 TNFRSF17Q02223 184 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ACTN3Q08043 901 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 TARDBPQ13148 414 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 COL9A2Q14055 689 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 PRSS53Q2L4Q9 553 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 FAM174BQ3ZCQ3 159 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 LACTB2Q53H82 288 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF385BQ569K4 471 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 COQ5Q5HYK3 327 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 DCAF12Q5T6F0 453 aa7.57□□□□□ -1.2
CPNE3-209ENST00000620393 ANXA8L1Q5VT79 327 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms