RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 RALGAPA2Q2PPJ7 1873 aa12.83□□□□□ -0.35
PCDHA11-202ENST00000616325 HPGDSO60760 199 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF623O75123 536 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 HRGP04196 525 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 CCND3P30281 292 aaPredicted RBP12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 HNF1BP35680 557 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 AVPR1BP47901 424 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 AKR1D1P51857 326 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ASAH1Q13510 395 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 FCN2Q15485 313 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 PLAG1Q6DJT9 500 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 XKRXQ6PP77 449 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ARSKQ6UWY0 536 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 VRK3Q8IV63 474 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 CEP76Q8TAP6 659 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 MAP4K5Q9Y4K4 846 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 GREB1Q4ZG55 1949 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 MYO16Q9Y6X6 1858 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 A0A075B6Q4 140 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 A0A1B0GVM2 712 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 RFXAPO00287 272 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 LYRM1O43325 122 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 KLK8O60259 260 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 TRBC1P01850 177 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 BPIP17213 487 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 GJA1P17302 382 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 CPN2P22792 545 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 IL32P24001 234 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ACSM2AQ08AH3 577 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 C1DQ13901 141 aaKnown RBP12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 GPR68Q15743 365 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ACSM2BQ68CK6 577 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 FAM122CQ6P4D5 195 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 CNIH2Q6PI25 160 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 FAM124AQ86V42 546 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 CALHM3Q86XJ0 350 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 BEST4Q8NFU0 473 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 AUTS2Q8WXX7 1259 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ZBED6CLQ96FA7 236 aaPredicted RBP12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 FUBP3Q96I24 572 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 PKP4Q99569 1192 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 TRAPPC4Q9Y296 219 aa12.83□□□□□ -0.36
PCDHA11-202ENST00000616325 LOC105369274A0A096LPK9 316 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 SHOXO15266 292 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 TPST2O60704 377 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 MRPS14O60783 128 aaKnown RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 STC2O76061 302 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 OAZ2O95190 189 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ICAM2P13598 275 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CTRB1P17538 263 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 FLT3LGP49771 235 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ITGA1P56199 1179 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CTBP2P56545 445 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 RRAS2P62070 204 aaPredicted RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 KLHL12Q53G59 568 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ZBTB37Q5TC79 503 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CTRB2Q6GPI1 263 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 FAHD1Q6P587 224 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 OR4N4Q8N0Y3 316 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 UPRTQ96BW1 309 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 FERD3LQ96RJ6 166 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 PITX2Q99697 317 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 LINC00597Q9H2U6 94 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 MCCC2Q9HCC0 563 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 EIF3KQ9UBQ5 218 aaKnown RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 RAB23Q9ULC3 237 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CCDC88CQ9P219 2028 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ZSWIM8A7E2V4 1837 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 FRMPD2BQ6IN97 320 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 FUT10Q6P4F1 479 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 SLC24A5Q71RS6 500 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 NAGSQ8N159 534 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ARL14EPQ8N8R7 260 aaPredicted RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 SCAMP4Q969E2 229 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 TADA1Q96BN2 335 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 GABARAPL1Q9H0R8 117 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 MIXL1Q9H2W2 232 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ZDHHC6Q9H6R6 413 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 SLAMF7Q9NQ25 335 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ZNF624Q9P2J8 865 aaPredicted RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 PPIEQ9UNP9 301 aaKnown RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ALPPP05187 535 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 TRAPPC2P0DI81 140 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 TRAPPC2BP0DI82 140 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 HMGCLP35914 325 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 GZMMP51124 257 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 MEF2AQ02078 507 aaPredicted RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 TTLL9Q3SXZ7 439 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 ATP13A5Q4VNC0 1218 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 TXNDC8Q6A555 127 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 NOXRED1Q6NXP6 359 aa12.82□□□□□ -0.36
PCDHA11-202ENST00000616325 CBLL1Q75N03 491 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms