RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 APODP05090 189 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ASGR2P07307 311 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCNYL3P0C7X3 344 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 NPPBP16860 134 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CD247P20963 164 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CNR2P34972 360 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TIE1P35590 1138 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 BCAP31P51572 246 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADNP2Q6IQ32 1131 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DUS1LQ6P1R4 473 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCDC116Q8IYX3 515 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.39□□□□□ -1.554e-7■■■□□ 16
SYNCRIP-204ENST00000616122 ZFP90Q8TF47 636 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SMARCD2Q92925 531 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ABHD8Q96I13 439 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC6A13Q9NSD5 602 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAIMQ9NVQ4 179 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TBCCD1Q9NVR7 557 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 MKLN1Q9UL63 735 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF780BQ9Y6R6 833 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DLEC1Q9Y238 1755 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 AGRPO00253 132 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GFRA2O00451 464 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 VEGFDO43915 354 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SAGP10523 405 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CELP19835 753 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DCKP27707 260 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCR4P51679 360 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GABARAPL2P60520 117 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DNASE1L3Q13609 305 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 COL9A2Q14055 689 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 EXOC3L2Q2M3D2 409 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CRTC2Q53ET0 693 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CLEC12AQ5QGZ9 265 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 C19orf18Q8NEA5 215 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ECHDC3Q96DC8 303 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 BARD1Q99728 777 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 C19orf43Q9BQ61 176 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ASIC5Q9NY37 505 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PPT2Q9UMR5 302 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 MRPS33Q9Y291 106 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 WDR45Q9Y484 360 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPC6Q9Y625 555 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM208BQ5VWN6 2430 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CDK5RAP2Q96SN8 1893 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 URADA6NGE7 173 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC30A4O14863 429 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARHGEF9O43307 516 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 VNN2O95498 520 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 C8orf89P0DMQ9 161 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ACADMP11310 421 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADRB3P13945 408 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 MPIP34949 423 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 COPZ1P61923 177 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SCN1BQ07699 218 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DEFB134Q4QY38 66 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 KLHL12Q53G59 568 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 IRAK1BP1Q5VVH5 260 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 KHDRBS2Q5VWX1 349 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GATAD2AQ86YP4 633 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 HDDC3Q8N4P3 179 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR9Q2Q8NGE9 314 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SETD7Q8WTS6 366 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DTD2Q96FN9 168 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPR83Q9NYM4 423 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 UTS2RQ9UKP6 389 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRIM43BA6NCK2 446 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR52A4PA6NMU1 304 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TLR4O00206 839 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCRL2O00421 344 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 SCAMP2O15127 329 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 LATO43561 262 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PSIP1O75475 530 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCCBP05166 539 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 HMGN2P05204 90 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ACPPP15309 386 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CPN2P22792 545 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 FEN1P39748 380 aaKnown RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 XKP51811 444 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TAS2R41P59536 307 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TIAL1Q01085 375 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 RELAQ04206 551 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PARGQ86W56 976 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 C10orf53Q8N6V4 93 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PJA1Q8NG27 643 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR52L1Q8NGH7 329 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZCCHC10Q8TBK6 192 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 RAB7BQ96AH8 199 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARMC5Q96C12 935 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PIP5K1AQ99755 562 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DSN1Q9H410 356 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCDH10Q9P2E7 1040 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 P2RX2Q9UBL9 471 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 STOML2Q9UJZ1 356 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PLAGL1Q9UM63 463 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR10H1Q9Y4A9 318 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM25AB3EWG3 89 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM25CB3EWG5 89 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM25GB3EWG6 89 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMX2-CTNND1H3BSU7 103 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms