RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PMM2O15305 246 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 AMHP03971 560 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 C1GALT1C1LP0DN25 315 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 NDUFA6P56556 154 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TNK1Q13470 666 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CLEC9AQ6UXN8 241 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TCEANCQ8N8B7 351 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 OR10G2Q8NGC3 310 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 NPRL2Q8WTW4 380 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CPB2Q96IY4 423 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TTPALQ9BTX7 342 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MAFBQ9Y5Q3 323 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GXYLT2A0PJZ3 443 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 NCF1BA6NI72 391 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 NCF1CA8MVU1 366 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SUPT20HL2P0C7V6 817 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GTF2H2Q13888 395 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GRIK4Q16099 956 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 IQCJQ1A5X6 159 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GTF2H2CQ6P1K8 395 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM81Q6P7N7 255 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF730Q6ZMV8 503 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GEMIN6Q8WXD5 167 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 KCTD13Q8WZ19 329 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 UBE2E3Q969T4 207 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MED8Q96G25 268 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 STRA6Q9BX79 667 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 LDAHQ9H6V9 325 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ASF1AQ9Y294 204 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ARL6IP5O75915 188 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SPDEFO95238 335 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 FGFR1P11362 822 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MRPL19P49406 292 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 FMO1Q01740 532 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 PIGFQ07326 219 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM179Q6ZVK1 233 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 RNF157Q96PX1 679 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 RBM38Q9H0Z9 239 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ASB7Q9H672 318 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 NANSQ9NR45 359 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 KANSL3Q9P2N6 904 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SAE1Q9UBE0 346 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 LRFN2Q9ULH4 789 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 PCDHB7Q9Y5E2 793 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GRAP2O75791 330 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GSRP00390 522 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MT-ND5P03915 603 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 IGKV5-2P06315 115 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 RFC3P40938 356 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SV2AQ7L0J3 742 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SLC16A9Q7RTY1 509 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ATG9AQ7Z3C6 839 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CAMK1GQ96NX5 476 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GMLQ99445 158 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SLX1AQ9BQ83 275 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 OR2AG1Q9H205 316 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 HIPK2Q9H2X6 1198 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CRYBG1Q9Y4K1 1723 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 PRAMEF22A3QJZ6 481 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 EEDO75530 441 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 JUNP05412 331 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CPB1P15086 417 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF25P17030 456 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 KCNC1P48547 511 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 RAP1AP62834 184 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF362Q5T0B9 420 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GGHQ92820 318 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF700Q9H0M5 742 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MRC1P22897 1456 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MLLT10P55197 1068 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GPR17Q13304 367 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CYP27C1Q4G0S4 372 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM41BQ5BJD5 291 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 FAM217AQ8IXS0 508 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 PLPP6Q8IY26 295 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SMARCD1Q96GM5 515 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SULT4A1Q9BR01 284 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 METTL17Q9H7H0 456 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZFP14Q9HCL3 533 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 MRPL22Q9NWU5 206 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 OPTCQ9UBM4 332 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 LAMP5Q9UJQ1 280 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 OR10H1Q9Y4A9 318 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 URB1O60287 2271 aaKnown RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SCN8AQ9UQD0 1980 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 AP4M1O00189 453 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 YY2O15391 372 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 LGI1O95970 557 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 IL17AQ16552 155 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 SBK1Q52WX2 424 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 RIPPLY2Q5TAB7 128 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF546Q86UE3 836 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 PIGXQ8TBF5 258 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ADAMTS19Q8TE59 1207 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 PKMYT1Q99640 499 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 LRTM1Q9HBL6 345 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 LUZP4Q9P127 313 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms