RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 GTF2H5Q6ZYL4 71 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 ENY2Q9NPA8 101 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 FZD4Q9ULV1 537 aa8.47□□□□□ -1.05
TTC28-208ENST00000612946 JRKO75564 520 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 USP17L7P0C7H9 530 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 BDKRB2P30411 391 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 SMARCD3Q6STE5 483 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 ZNF783Q6ZMS7 281 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 TRAPPC5Q8IUR0 188 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 OR6V1Q8N148 313 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 OR6K6Q8NGW6 343 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 BBS10Q8TAM1 723 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 C7orf34Q96L11 122 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 MED18Q9BUE0 208 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 DBNDD1Q9H9R9 158 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 PCDHGA5Q9Y5G8 931 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 OR6C74A6NCV1 312 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 SOCS2O14508 198 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 TMEM127O75204 238 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 ATP5A1P25705 553 aaKnown RBP8.46□□□□□ -1.05
TTC28-208ENST00000612946 MAGEB1P43366 347 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 ZNF563Q8TA94 476 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 CAPN14A8MX76 684 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 SCAMP3O14828 347 aaKnown RBP8.46□□□□□ -1.05
TTC28-208ENST00000612946 BMP8BP34820 402 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 NSG1P42857 185 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 CREB5Q02930 508 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 TAP2Q03519 686 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 SGCGQ13326 291 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 KCTD9Q7L273 389 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 BMP8AQ7Z5Y6 402 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 TGM7Q96PF1 710 aa8.46□□□□□ -1.05
TTC28-208ENST00000612946 LRRC72A6NJI9 287 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 TLX2O43763 284 aaPredicted RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 CKBP12277 381 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 CHIT1Q13231 466 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 CBX2Q14781 532 aaPredicted RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 RPL22L1Q6P5R6 122 aaKnown RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 ARHGAP12Q8IWW6 846 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 KIAA1191Q96A73 305 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 BTN2A3PQ96KV6 586 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 TXLNGYQ9BZA5 131 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 SLC5A7Q9GZV3 580 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 QTRT2Q9H974 415 aaKnown RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 VPS29Q9UBQ0 182 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 COL1A2P08123 1366 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 RFXAPO00287 272 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 RIN1Q13671 783 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 ACTBL2Q562R1 376 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 LRRC46Q96FV0 321 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 OSGEPL1Q9H4B0 414 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PCDHB7Q9Y5E2 793 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 E7EQ34 232 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 E7ESA3 106 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 J3KR12 359 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 GOSR2O14653 212 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 ZNF132P52740 706 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 KCNRGQ8N5I3 272 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PARP16Q8N5Y8 322 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 FAM83FQ8NEG4 500 aaPredicted RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 RNF141Q8WVD5 230 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 ZNF514Q96K75 400 aaPredicted RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 BEX2Q9BXY8 128 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 KPTNQ9Y664 436 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 RGS11O94810 467 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 SCGB1D2O95969 90 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 DCNP07585 359 aaKnown RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 GGT1P19440 569 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PRKAG1P54619 331 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 RAB31Q13636 194 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 HLFQ16534 295 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 OR2AJ1Q8NGZ0 328 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PARK7Q99497 189 aaKnown RBP8.46□□□□□ -1.06
TTC28-208ENST00000612946 CLDN11O75508 207 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 BPNT1O95861 308 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 AKAIN1P0CW23 69 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 CD53P19397 219 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 MAP2K4P45985 399 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 SPCS2Q15005 226 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 CHRNA6Q15825 494 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 ATAT1Q5SQI0 421 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 DHRS4L2Q6PKH6 230 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 NUDT13Q86X67 352 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 GSX2Q9BZM3 304 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 SPG21Q9NZD8 308 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 FBXO7Q9Y3I1 522 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 XYLBO75191 536 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 SPDEFO95238 335 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 CTXN3Q4LDR2 81 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 C9orf64Q5T6V5 341 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 RAP1GAP2Q684P5 730 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 BRINP3Q76B58 766 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PROKR2Q8NFJ6 384 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 PIM2Q9P1W9 311 aa8.46□□□□□ -1.06
TTC28-208ENST00000612946 BRWD1Q9NSI6 2320 aa8.45□□□□□ -1.06
TTC28-208ENST00000612946 ELOA3DA6NLF2 546 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms