RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 DRICH1Q6PGQ1 229 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 MAATS1Q7Z4T9 603 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 KIF18BQ86Y91 864 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 KRTAP1-3Q8IUG1 177 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 LIX1Q8N485 282 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 GPATCH11Q8N954 259 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 NAXEQ8NCW5 288 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 ATL1Q8WXF7 558 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 GAL3ST3Q96A11 431 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 CAPZA3Q96KX2 299 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 YIPF4Q9BSR8 244 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 OR8D2Q9GZM6 311 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF703Q9H7S9 590 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 PLEKHF2Q9H8W4 249 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 PELI2Q9HAT8 420 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 SEMA4BQ9NPR2 832 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 PCDHGB3Q9Y5G1 929 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 DOCK7Q96N67 2140 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 KIAA1549Q9HCM3 1950 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 ZCWPW2A0A1B0GU75 182 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 MAGEB16A2A368 324 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 CLCA1A8K7I4 914 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 ARHGEF9O43307 516 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 B3GALT2O43825 422 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 GUCA1CO95843 209 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 VPS41P49754 854 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 HNRNPFP52597 415 aaKnown RBP15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 KCNJ2P63252 427 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 RUNX2Q13950 521 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 SIX1Q15475 284 aaPredicted RBP15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 PAQR3Q6TCH7 311 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 SEM1Q6ZVN7 128 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF595Q8IYB9 648 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 MORN4Q8NDC4 146 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 TMEM52Q8NDY8 209 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 TNIP2Q8NFZ5 429 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 OR14A16Q8NHC5 309 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 CCT6BQ92526 530 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 FBXL8Q96CD0 374 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 FAM167BQ9BTA0 163 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 NPLQ9BXD5 320 aaPredicted RBP15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 SLC6A15Q9H2J7 730 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 BOKQ9UMX3 212 aaPredicted RBP15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 CLDN16Q9Y5I7 305 aa15.88■□□□□ 0.13
CSNK1E-215ENST00000612795 A0A088AWK7 358 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 SDR42E2A6NKP2 422 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 ERI3O43414 337 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 GOSR1O95249 250 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 CD53P19397 219 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF10P21506 573 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 PIGAP37287 484 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 KCNJ1P48048 391 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 WNT3P56703 355 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 RNF4P78317 190 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 POU4F3Q15319 338 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 TRIP13Q15645 432 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 CXXC5Q7LFL8 322 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 CAND1Q86VP6 1230 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 OR5L2Q8NGL0 311 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 SPATA3Q8NHX4 192 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 LINC01560Q8TB33 94 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 NANOS1Q8WY41 292 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 DESI2Q9BSY9 194 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 AICDAQ9GZX7 198 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 COPS7AQ9UBW8 275 aa15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF629Q9UEG4 869 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-215ENST00000612795 ARID1AO14497 2285 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 MYOCOSA0A1B0GUC4 107 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 EEF1E1-BLOC1S5C9J1V9 151 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 EEF1E1O43324 174 aaKnown RBP15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 IL2RAP01589 272 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 TNNI3P19429 210 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 STX4Q12846 297 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 ACSF3Q4G176 576 aaPredicted RBP15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 HSP90AA5PQ58FG0 334 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 Q5PR19 223 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 PRAMEF20Q5VT98 475 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 NXPE4Q6UWF7 544 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 THOC6Q86W42 341 aaKnown RBP15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 LACC1Q8IV20 430 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 P3H2Q8IVL5 708 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 VWA5B2Q8N398 1253 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF321PQ8N8H1 164 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 OR8K3Q8NH51 312 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 NEIL3Q8TAT5 605 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 HSPBAP1Q96EW2 488 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 COX4I2Q96KJ9 171 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 IARS2Q9NSE4 1012 aaKnown RBP15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
CSNK1E-215ENST00000612795 TLN2Q9Y4G6 2542 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 C15orf38-AP3S2A0A0A6YYH1 394 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 C17orf105B2RV13 164 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 GOLGA8MH3BSY2 632 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 H7C1Q1 480 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 ZNF354AO60765 605 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 RFPL3SP0C7P2 107 aa15.85■□□□□ 0.13
CSNK1E-215ENST00000612795 MLNP12872 115 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms