RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	CREB3L2	Q70SY1	520 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	TSPAN33	Q86UF1	283 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	C11orf74	Q86VG3	221 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	CCDC28A	Q8IWP9	274 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	KLHDC8A	Q8IYD2	350 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	CAMKK1	Q8N5S9	505 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR8J1	Q8NGP2	316 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	REEP4	Q9H6H4	257 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ANKRA2	Q9H9E1	313 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	RC3H2	Q9HBD1	1191 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	SGK2	Q9HBY8	427 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	REV1	Q9UBZ9	1251 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	SATB2	Q9UPW6	733 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	MGAT4B	Q9UQ53	548 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	SNX11	Q9Y5W9	270 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	PLXNB3	Q9ULL4	1909 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130		A0A0X1KG70	313 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	GNG14	A0A1W2PPG7	69 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	LATS1	O95835	1130 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CCNYL3	P0C7X3	344 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	MSL3P1	P0C860	447 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	SRC	P12931	536 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CPE	P16870	476 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	RPL3	P39023	403 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR3A3	P47888	321 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TGM4	P49221	684 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	HOXC5	Q00444	222 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TATDN3	Q17R31	274 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	LIPK	Q5VXJ0	399 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CRTC1	Q6UUV9	634 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRIM48	Q8IWZ4	208 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRPV1	Q8NER1	839 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	SLC6A18	Q96N87	628 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	NELL2	Q99435	816 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	GTPBP2	Q9BX10	602 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TSSK6	Q9BXA6	273 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	KLF16	Q9BXK1	252 aa	Predicted RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TOR4A	Q9NXH8	423 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TMCC3	Q9ULS5	477 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	DIMT1	Q9UNQ2	313 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	EXO1	Q9UQ84	846 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	DOCK3	Q8IZD9	2030 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	NUP214	P35658	2090 aa	Predicted RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	C6orf47	O95873	294 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	IGSF6	O95976	241 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CSF2	P04141	144 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	GSTM1	P09488	218 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	SERPINA4	P29622	427 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	IRS1	P35568	1242 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	PNLIPRP1	P54315	467 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	PPP3R1	P63098	170 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	MXD1	Q05195	221 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF763	Q0D2J5	394 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CDH18	Q13634	790 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRIM71	Q2Q1W2	868 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CYP27C1	Q4G0S4	372 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF628	Q5EBL2	1059 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZDHHC20	Q5W0Z9	365 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	MZT2B	Q6NZ67	158 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	LYPD8	Q6UX82	237 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	CASP12	Q6UXS9	341 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	TPRG1	Q6ZUI0	275 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	FAM217A	Q8IXS0	508 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	ELMOD2	Q8IZ81	293 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	DUSP18	Q8NEJ0	188 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	SOCS4	Q8WXH5	440 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	SNAPC3	Q92966	411 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	WBP2	Q969T9	261 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	KCTD7	Q96MP8	289 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	RBFOX1	Q9NWB1	397 aa	Known RBP	13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	ING3	Q9NXR8	418 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	GULP1	Q9UBP9	304 aa		13.12	□□□□□ -0.31
UBE2F-223	ENST00000612130	WWP2	O00308	870 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	STK25	O00506	426 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	PLD2	O14939	933 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	SMAD6	O43541	496 aa	Known RBP	13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPR37L1	O60883	481 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	AP2A2	O94973	939 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	RECK	O95980	971 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	M6PR	P20645	277 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	PDE7A	Q13946	482 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRIQK	Q629K1	86 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR4K1	Q8NGD4	311 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	DEDD2	Q8WXF8	326 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	LINC01599	Q8WXQ3	324 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	ASIC4	Q96FT7	647 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	DHRS9	Q9BPW9	319 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	SYT17	Q9BSW7	474 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPSM3	Q9Y4H4	160 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	ALG5	Q9Y673	324 aa		13.11	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRBV4-1	A0A0J9YWV2	114 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130		A8MX80	341 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	FAAH	O00519	579 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	RAB36	O95755	333 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	ATP1B2	P14415	290 aa	Predicted RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms