RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 HSPA7P48741 367 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 LIM2P55344 173 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 CDKL1Q00532 357 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 TFF3Q07654 80 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 PDIA2Q13087 525 aaKnown RBP12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 SNTB1Q13884 538 aaKnown RBP12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 RCN2Q14257 317 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 MORF4L2Q15014 288 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 GXYLT1Q4G148 440 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 STEAP4Q687X5 459 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 RTL4Q6ZR62 310 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 WDR53Q7Z5U6 358 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 GPALPP1Q8IXQ4 340 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 TMEM251Q8N6I4 163 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 FBXO36Q8NEA4 188 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 QRFPRQ96P65 431 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 F2RL3Q96RI0 385 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 SERINC2Q96SA4 455 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 TREX2Q9BQ50 279 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 FAM173AQ9BQD7 235 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 TMEM79Q9BSE2 394 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 ALOXE3Q9BYJ1 711 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 CAB39LQ9H9S4 337 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 ACAD8Q9UKU7 415 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 TEX264Q9Y6I9 313 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 MAP1AP78559 2803 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 NINQ8N4C6 2090 aa12.38□□□□□ -0.43
HMGB1P24-201ENST00000611897 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 TMEM200CA6NKL6 621 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 RTCAO00442 366 aaKnown RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 PHGDHO43175 533 aaKnown RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 CCNT2O60583 730 aaKnown RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 P04436 131 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 CCL3P10147 92 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 PCNAP12004 261 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 HPDP32754 393 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 MAN2A2P49641 1150 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 DR1Q01658 176 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 TGM3Q08188 693 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 TGFBIQ15582 683 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 CES4AQ5XG92 561 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 VN1R5Q7Z5H4 357 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 CLYBLQ8N0X4 340 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 FAM109AQ8N4B1 249 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 SLC2A12Q8TD20 617 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 DOK4Q8TEW6 326 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 MAPKAP1Q9BPZ7 522 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 CNPPD1Q9BV87 410 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 SACM1LQ9NTJ5 587 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 TUBA8Q9NY65 449 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 CD274Q9NZQ7 290 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 COPS7AQ9UBW8 275 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 DAPP1Q9UN19 280 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 PPIEQ9UNP9 301 aaKnown RBP12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 FREM3P0C091 2139 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 NCKAP5O14513 1909 aa12.37□□□□□ -0.43
HMGB1P24-201ENST00000611897 ACANP16112 2415 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 SAP18O00422 153 aaKnown RBP12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 CYR61O00622 381 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 BCKDKO14874 412 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 PRAMEF4O60810 478 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 CTNSO60931 367 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 LRATO95237 230 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 S100BP04271 92 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 HOXD4P09016 255 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 IVDP26440 423 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 GSTM2P28161 218 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 PIGAP37287 484 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 MSH2P43246 934 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 SSR2P43308 183 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 KCNJ2P63252 427 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 RNF4P78317 190 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 ASPHQ12797 758 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 DOC2AQ14183 400 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 EFTUD2Q15029 972 aaKnown RBP eCLIP12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 PDK4Q16654 411 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 PRAMEF20Q5VT98 475 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 PRAMEF9Q5VWM5 478 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 RGS9BPQ6ZS82 235 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 TRILQ7L0X0 811 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 GPSM1Q86YR5 675 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 OR4N5Q8IXE1 308 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 ZZZ3Q8IYH5 903 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 MORN4Q8NDC4 146 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 PTPMT1Q8WUK0 201 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 SLCO2A1Q92959 643 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 LRRC39Q96DD0 335 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 JSRP1Q96MG2 331 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 KRT12Q99456 494 aa12.36□□□□□ -0.43
HMGB1P24-201ENST00000611897 TTYH2Q9BSA4 534 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms