RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 ALDH9A1P49189 494 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 MAPK12P53778 367 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 CYP4F2P78329 520 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 TEKQ02763 1124 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 ELAVL3Q14576 367 aaKnown RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 PTGES3Q15185 160 aaKnown RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 GAB4Q2WGN9 574 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 ZNF404Q494X3 552 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 RBM12BQ8IXT5 1001 aaKnown RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 NRTNQ99748 197 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 OR52A5Q9H2C5 316 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 ICKQ9UPZ9 632 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 LOC100506127A0A0U1RQW1 187 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 RPLP0P05388 317 aaKnown RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 HMGA2P52926 109 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 MANFP55145 182 aaKnown RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 RPS26P62854 115 aaKnown RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 DNASE1L3Q13609 305 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 DUSP7Q16829 419 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 USP43Q70EL4 1123 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 SLC46A3Q7Z3Q1 461 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 C17orf64Q86WR6 236 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 SLC44A2Q8IWA5 706 aaPredicted RBP16.42■□□□□ 0.22
NEK3-206ENST00000611833 PLA2G15Q8NCC3 412 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 PSMA8Q8TAA3 256 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 PPP1R16AQ96I34 528 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 FAM210AQ96ND0 272 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 MAPKAP1Q9BPZ7 522 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 MMP27Q9H306 513 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 SPATA7Q9P0W8 599 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 TSC22D4Q9Y3Q8 395 aa16.42■□□□□ 0.22
NEK3-206ENST00000611833 ANTXRLA6NF34 631 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 RTCAO00442 366 aaKnown RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 PLPP1O14494 284 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 GASTP01350 101 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 ALOX5P09917 674 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 HSMCR30P0CW71 290 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 ADORA3P0DMS8 318 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 DBTP11182 482 aaKnown RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 DDCP20711 480 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 FUT4P22083 530 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 LIMS1P48059 325 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 PPP5CP53041 499 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 CBX3Q13185 183 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 ZNF234Q14588 700 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 MAPK11Q15759 364 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 FBXO43Q4G163 708 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 RPS26P11Q5JNZ5 115 aaPredicted RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 TNFAIP8L2Q6P589 184 aaPredicted RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 FAM129CQ86XR2 697 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 ZBTB8BQ8NAP8 495 aaPredicted RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 TFGQ92734 400 aaPredicted RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 TAC3Q9UHF0 121 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 ZSCAN9O15535 394 aaPredicted RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 CNOT3O75175 753 aaKnown RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 SERPINB7O75635 380 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 BCHEP06276 602 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 CBLP22681 906 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 POU1F1P28069 291 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 ARMCX4Q5H9R4 360 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 KHDRBS2Q5VWX1 349 aaKnown RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 PDZD3Q86UT5 571 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 AMZ2Q86W34 360 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 DCUN1D3Q8IWE4 304 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 B3GNT7Q8NFL0 401 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 F2RL3Q96RI0 385 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 C6orf62Q9GZU0 229 aaPredicted RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 ZDHHC4Q9NPG8 344 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 DEC1Q9P2X7 70 aa16.41■□□□□ 0.22
NEK3-206ENST00000611833 KIAA0100Q14667 2235 aaKnown RBP16.41■□□□□ 0.22
NEK3-206ENST00000611833 PLXND1Q9Y4D7 1925 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 HEPACAM2A8MVW5 462 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 TBX6O95947 436 aaPredicted RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 PTHP01270 115 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 EIF4HQ15056 248 aaKnown RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 SPDYE7PQ495Y7 208 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 DEPDC1Q5TB30 811 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 PTCHD4Q6ZW05 846 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 ERN2Q76MJ5 926 aaKnown RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 MMAAQ8IVH4 418 aaKnown RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 HORMAD2Q8N7B1 307 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 AMER2Q8N7J2 671 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 PDXPQ96GD0 296 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 AIF1LQ9BQI0 150 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 TMEM245Q9H330 911 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 NMNAT1Q9HAN9 279 aaPredicted RBP16.4■□□□□ 0.22
NEK3-206ENST00000611833 SLC6A14Q9UN76 642 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 METTL15A6NJ78 407 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 PDPK1O15530 556 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 RB1P06400 928 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 TGM1P22735 817 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 CRISP1P54107 249 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 OLR1P78380 273 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 TMEM52BQ4KMG9 183 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 KLHL17Q6TDP4 642 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 PLEKHG7Q6ZR37 379 aa16.4■□□□□ 0.22
NEK3-206ENST00000611833 NLGN4XQ8N0W4 816 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms