RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 MAGEA4P43358 317 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PLTPP55058 493 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 GPR85P60893 370 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 IRF8Q02556 426 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PCDH1Q08174 1060 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 DLG1Q12959 904 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 SERTAD2Q14140 314 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 RCN2Q14257 317 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 TRADDQ15628 312 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ELAVL1Q15717 326 aaKnown RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 KBTBD12Q3ZCT8 623 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 TMEM35AQ53FP2 167 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 CMPK2Q5EBM0 449 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PAGE2BQ5JRK9 111 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 IL20RBQ6UXL0 311 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 HSDL2Q6YN16 418 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ZNF793Q6ZN11 406 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 CHSY3Q70JA7 882 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 GDF7Q7Z4P5 450 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 CTAGE3PQ8IX95 158 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 GPALPP1Q8IXQ4 340 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 LAS2Q8IYD9 372 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 EID3Q8N140 333 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PPM1NQ8N819 430 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ZNF321PQ8N8H1 164 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ACOT4Q8N9L9 421 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 MORN4Q8NDC4 146 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 SRFBP1Q8NEF9 429 aaKnown RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 OR52N2Q8NGI0 321 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 STAG3L4Q8TBR4 150 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ZNF473Q8WTR7 871 aaKnown RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 ASB15Q8WXK1 588 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 DAZLQ92904 295 aaKnown RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 ANKRD9Q96BM1 317 aaPredicted RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 KCNC2Q96PR1 638 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ATOH8Q96SQ7 321 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 TBCDQ9BTW9 1192 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 MS4A8Q9BY19 250 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 TRIM8Q9BZR9 551 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ROGDIQ9GZN7 287 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ALG9Q9H6U8 611 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 COPS7BQ9H9Q2 264 aaPredicted RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PLSCR2Q9NRY7 297 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 HPF1Q9NWY4 346 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 PPT2Q9UMR5 302 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 ERVK-11Q9UQG0 969 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 UTP11Q9Y3A2 253 aaKnown RBP7.08□□□□□ -1.28
CUX1-219ENST00000606749 ADGRG4Q8IZF6 3080 aa7.08□□□□□ -1.28
CUX1-219ENST00000606749 APCP25054 2843 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 DCHS2Q6V1P9 2916 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 PINLYPA6NC86 204 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 C17orf105B2RV13 164 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 RTCAO00442 366 aaKnown RBP7.07□□□□□ -1.28
CUX1-219ENST00000606749 CDC40O60508 579 aaKnown RBP eCLIP7.07□□□□□ -1.28
CUX1-219ENST00000606749 SH3BGRLO75368 114 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR6B1O95007 311 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 ETHE1O95571 254 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 TPOP07202 933 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 LTA4HP09960 611 aaKnown RBP7.07□□□□□ -1.28
CUX1-219ENST00000606749 PCNAP12004 261 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 MTHFD2P13995 350 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 TNNI3P19429 210 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 CNR1P21554 472 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 HIST1H1TP22492 207 aaPredicted RBP7.07□□□□□ -1.28
CUX1-219ENST00000606749 CRABP2P29373 138 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 SOX3P41225 446 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 NR0B1P51843 470 aaKnown RBP7.07□□□□□ -1.28
CUX1-219ENST00000606749 HK2P52789 917 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 PPIAP62937 165 aaKnown RBP7.07□□□□□ -1.28
CUX1-219ENST00000606749 RNF4P78317 190 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 ID2Q02363 134 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 GUCY2DQ02846 1103 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 CAV1Q03135 178 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 C2orf54Q08AI8 447 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 STX4Q12846 297 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 SLAMF1Q13291 335 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 AP5B1Q2VPB7 878 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 ZNF750Q32MQ0 723 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 DEPDC1Q5TB30 811 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR4C11Q6IEV9 310 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 MED27Q6P2C8 311 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 RAPH1Q70E73 1250 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 LRRC70Q7Z2Q7 622 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 CMC1Q7Z7K0 106 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 MARVELD2Q8N4S9 558 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 PSD4Q8NDX1 1056 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR2M7Q8NG81 312 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR7G3Q8NG95 312 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR8K3Q8NH51 312 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR14A16Q8NHC5 309 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 FBXO25Q8TCJ0 367 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 FBF1Q8TES7 1133 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 ZNF721Q8TF20 911 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 CA5BP1Q8WTZ4 195 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 SREK1Q8WXA9 508 aaKnown RBP7.07□□□□□ -1.28
CUX1-219ENST00000606749 EXT2Q93063 718 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 UBE2E3Q969T4 207 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 SDCCAG3Q96C92 435 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 NXNL1Q96CM4 212 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms