RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 CLDN16Q9Y5I7 305 aa16.34■□□□□ 0.21
SHKBP1-223ENST00000600552 PDZD2O15018 2839 aa16.33■□□□□ 0.21
SHKBP1-223ENST00000600552 C17orf105B2RV13 164 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 SUPT3HB4E1H0 165 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 NPIPA2E9PIF3 369 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 NPIPA3F8WFD2 350 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 SUPT3HO75486 399 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 FAM155BO75949 473 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 TGFB1P01137 390 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 CD22P20273 847 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 GSTM2P28161 218 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 GPR143P51810 404 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 ATP6V0D1P61421 351 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 TLE4Q04727 773 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 LAPTM5Q13571 262 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 DDX39BQ13838 428 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 SLMAPQ14BN4 828 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 PAGE2BQ5JRK9 111 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 CCDC71Q8IV32 467 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 OR4N5Q8IXE1 308 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 ARMC10Q8N2F6 343 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 MARVELD2Q8N4S9 558 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 ZFP62Q8NB50 900 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 OR2M7Q8NG81 312 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 OR5M9Q8NGP3 310 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 C16orf52Q8NHV5 167 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 DAZLQ92904 295 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 CPNE1Q99829 537 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 EFCAB11Q9BUY7 163 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 UCK2Q9BZX2 261 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 MYOTQ9UBF9 498 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 POLQO75417 2590 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 DNAJC13O75165 2243 aa16.33■□□□□ 0.2
SHKBP1-223ENST00000600552 NKX2-6A6NCS4 301 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 TMEM200CA6NKL6 621 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 ACOT7O00154 380 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 CPN2P22792 545 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 KCNC1P48547 511 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 HK2P52789 917 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 RAB10P61026 200 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PMPCAQ10713 525 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 EFTUD2Q15029 972 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 AP5B1Q2VPB7 878 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 TMEM211Q6ICI0 200 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 ARHGAP11AQ6P4F7 1023 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 C3orf62Q6ZUJ4 267 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 MYLK4Q86YV6 388 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 RPRMLQ8N4K4 120 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PPM1NQ8N819 430 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 OR14A16Q8NHC5 309 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PTPMT1Q8WUK0 201 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 MRRFQ96E11 262 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 RASL10BQ96S79 203 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 RBBP8Q99708 897 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 MCMBPQ9BTE3 642 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 SORBS1Q9BX66 1292 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PITHD1Q9GZP4 211 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 EHD1Q9H4M9 534 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PTBP2Q9UKA9 531 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 PPIEQ9UNP9 301 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 SPACA6W5XKT8 324 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 DCHS2Q6V1P9 2916 aa16.32■□□□□ 0.2
SHKBP1-223ENST00000600552 TCRBV9S1A1TA0A576 114 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 WISP3O95389 354 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ATP5A1P25705 553 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 GGT5P36269 586 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 GP5P40197 560 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 SSR2P43308 183 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 C2orf54Q08AI8 447 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ADPRMQ3LIE5 342 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ZNF585AQ6P3V2 769 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ZNF793Q6ZN11 406 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 UBE3DQ7Z6J8 389 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 CMC1Q7Z7K0 106 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 RNF175Q8N4F7 328 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ACOT4Q8N9L9 421 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 MORN4Q8NDC4 146 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 OR5M3Q8NGP4 307 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 OR10Q1Q8NGQ4 319 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 SLC2A12Q8TD20 617 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 RND1Q92730 232 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 KIAA1191Q96A73 305 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 PPWD1Q96BP3 646 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 SEC16BQ96JE7 1060 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 GPR22Q99680 433 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ERP44Q9BS26 406 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 CD244Q9BZW8 370 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ROGDIQ9GZN7 287 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 TP63Q9H3D4 680 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 EXO5Q9H790 373 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 ALKBH4Q9NXW9 302 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 TNFRSF10DQ9UBN6 386 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 VTI1BQ9UEU0 232 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 RNF6Q9Y252 685 aa16.31■□□□□ 0.2
SHKBP1-223ENST00000600552 OTOGQ6ZRI0 2925 aa16.3■□□□□ 0.2
SHKBP1-223ENST00000600552 INTS1Q8N201 2190 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms