RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 VMP1Q96GC9 406 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 MAPKAP1Q9BPZ7 522 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 HES7Q9BYE0 225 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 ACTR8Q9H981 624 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 PRM3Q9NNZ6 103 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 SEC14L3Q9UDX4 400 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 ZNF180Q9UJW8 692 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 PCDHGA11Q9Y5H2 935 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 SPACA6W5XKT8 324 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 PCNX1Q96RV3 2341 aa13.44□□□□□ -0.26
PPFIA4-212ENST00000600447 H0YIV9 168 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 RTCAO00442 366 aaKnown RBP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 SLC25A12O75746 678 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 UNC5CO95185 931 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 CLDN1O95832 211 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 RBP1P09455 135 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 COL6A2P12110 1019 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 ARFIP1P53367 373 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 STX4Q12846 297 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 DDX39BQ13838 428 aaKnown RBP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 GTF2H2Q13888 395 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 TSNAXIP1Q2TAA8 658 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 OR4C11Q6IEV9 310 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 SLC25A25Q6KCM7 469 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 GTF2H2CQ6P1K8 395 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 GALNTL5Q7Z4T8 443 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 GOLGA7Q7Z5G4 137 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 MYLK4Q86YV6 388 aaPredicted RBP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 L3MBTL4Q8NA19 623 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 FAM98AQ8NCA5 519 aaKnown RBP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 DCAKDQ8WVC6 231 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 RELTQ969Z4 430 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 RGMAQ96B86 450 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 REPS1Q96D71 796 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 MTERF1Q99551 399 aaKnown RBP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 CENPKQ9BS16 269 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 ALOXE3Q9BYJ1 711 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 OR51B5Q9H339 312 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 IPPKQ9H8X2 491 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 DMRT3Q9NQL9 472 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 ZNF358Q9NW07 568 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 VTI1BQ9UEU0 232 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 ZNF223Q9UK11 482 aaPredicted RBP13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 CLCA3PQ9Y6N3 262 aa13.43□□□□□ -0.26
PPFIA4-212ENST00000600447 A0A087WUV0 522 aaPredicted RBP13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 NME2P1O60361 137 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 SH3BGRLO75368 114 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 SIX3O95343 332 aaPredicted RBP13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 MLYCDO95822 493 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 IFNA16P05015 189 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 NME2P22392 152 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 PTX3P26022 381 aaPredicted RBP13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 PHEXP78562 749 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 SRSF11Q05519 484 aaKnown RBP13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 SERTAD2Q14140 314 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 C1QL3Q5VWW1 255 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 HIST2H2BCQ6DN03 193 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 RNF175Q8N4F7 328 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 CEP112Q8N8E3 955 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 MORN4Q8NDC4 146 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 C7orf57Q8NEG2 295 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 OR14A16Q8NHC5 309 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 THAP3Q8WTV1 239 aaPredicted RBP13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 DAZLQ92904 295 aaKnown RBP13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 TMEM125Q96AQ2 219 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 FRMD6Q96NE9 622 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 CCDC77Q9BR77 488 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 MS4A12Q9NXJ0 267 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 FBXW2Q9UKT8 454 aa13.42□□□□□ -0.26
PPFIA4-212ENST00000600447 TRIM49D1C9J1S8 452 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 POC1B-GALNT4F8VUJ3 575 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 STX16-NPEPL1H3BU86 382 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 SAP18O00422 153 aaKnown RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 PLPP1O14494 284 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 STX16O14662 325 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 LDB3O75112 727 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 ITGA10O75578 1167 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 ZFAND5O76080 213 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 ABHD2P08910 425 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 CPN2P22792 545 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 RPS13P62277 151 aaKnown RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 ALDH6A1Q02252 535 aaKnown RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 RBPJQ06330 500 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 SLAMF1Q13291 335 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 CPSF6Q16630 551 aaKnown RBP eCLIP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 MAPKAPK3Q16644 382 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 KRTCAP3Q53RY4 240 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 FJX1Q86VR8 437 aa13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 ZCCHC7Q8N3Z6 543 aaKnown RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 PTGR2Q8N8N7 351 aaPredicted RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 PTPMT1Q8WUK0 201 aaPredicted RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 ANKRD9Q96BM1 317 aaPredicted RBP13.41□□□□□ -0.26
PPFIA4-212ENST00000600447 PHF21BQ96EK2 531 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms