RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ASIC5	Q9NY37	505 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	HCN3	Q9P1Z3	774 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	CTSF	Q9UBX1	484 aa		20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	MRPS18B	Q9Y676	258 aa	Known RBP	20.74	■□□□□ 0.91
LTBP4-227	ENST00000600026	SCEL	O95171	688 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	WT1	P19544	449 aa	Predicted RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	NCF2	P19878	526 aa	Predicted RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	ITPKB	P27987	946 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	RPS18	P62269	152 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	RPS15	P62841	145 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	OLR1	P78380	273 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	RAE1	P78406	368 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	IRX1	P78414	480 aa	Predicted RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	TLE3	Q04726	772 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	NKG7	Q16617	165 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	GSTA3	Q16772	222 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	FAM9C	Q8IZT9	166 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	SHISA5	Q8N114	240 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZCCHC7	Q8N3Z6	543 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	ACOT4	Q8N9L9	421 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	CCDC197	Q8NCU1	140 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	OR5T3	Q8NGG3	340 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	C11orf24	Q96F05	449 aa	Predicted RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	YIPF2	Q9BWQ6	316 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	NPL	Q9BXD5	320 aa	Predicted RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	EBPL	Q9BY08	206 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	GPR87	Q9BY21	358 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	SLC26A1	Q9H2B4	701 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	CLK4	Q9HAZ1	481 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	LYAR	Q9NX58	379 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	TRPC4	Q9UBN4	977 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	KCND3	Q9UK17	655 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	G3BP2	Q9UN86	482 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	FARSA	Q9Y285	508 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	MAP4K5	Q9Y4K4	846 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	PCDHGA6	Q9Y5G7	932 aa		20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	URB1	O60287	2271 aa	Known RBP	20.73	■□□□□ 0.91
LTBP4-227	ENST00000600026	IGLV3-12	A0A075B6K2	115 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026		A0A0A6YYD5	115 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	GUCY1B2	O75343	617 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	EED	O75530	441 aa	Known RBP	20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	ALB	P02768	609 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	BCKDHA	P12694	445 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	IDO1	P14902	403 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	CERS1	P27544	350 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	PTPN4	P29074	926 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	TPP2	P29144	1249 aa	Predicted RBP	20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	GSTM5	P46439	218 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	MAPK12	P53778	367 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	FOXL2	P58012	376 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	STX1B	P61266	288 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	TRA2B	P62995	288 aa	Known RBP	20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	RPS6KA2	Q15349	733 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	BROX	Q5VW32	411 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	TMEM198	Q66K66	360 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZNF793	Q6ZN11	406 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	LIX1	Q8N485	282 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	ANKS4B	Q8N8V4	417 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	CATSPER2	Q96P56	530 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	ACTL8	Q9H568	366 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	HEY2	Q9UBP5	337 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZNF282	Q9UDV7	671 aa	Predicted RBP	20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	PADI2	Q9Y2J8	665 aa		20.72	■□□□□ 0.91
LTBP4-227	ENST00000600026	DNAJB6	O75190	326 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	GBA	P04062	536 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	ALDOC	P09972	364 aa	Known RBP	20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	ASMT	P46597	345 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZNF763	Q0D2J5	394 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	SLAMF1	Q13291	335 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	FAM69B	Q5VUD6	431 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	TMEM151B	Q8IW70	566 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	ZC3H7A	Q8IWR0	971 aa	Known RBP	20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	CA13	Q8N1Q1	262 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	STT3B	Q8TCJ2	826 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	STARD8	Q92502	1023 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	SPSB2	Q99619	263 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	FAM117A	Q9C073	453 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	WDR54	Q9H977	334 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	MKKS	Q9NPJ1	570 aa	Predicted RBP	20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	MRGBP	Q9NV56	204 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	AIG1	Q9NVV5	245 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	TCFL5	Q9UL49	500 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	DLGAP4	Q9Y2H0	992 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	WBP11	Q9Y2W2	641 aa	Known RBP	20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	PTRH2	Q9Y3E5	179 aa	Known RBP	20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	SPACA6	W5XKT8	324 aa		20.71	■□□□□ 0.91
LTBP4-227	ENST00000600026	SCN2A	Q99250	2005 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	VSTM2B	A6NLU5	285 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	EFS	O43281	561 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	CCDC22	O60826	627 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	KLF7	O75840	302 aa	Predicted RBP	20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	CD63	P08962	238 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	FAM58BP	P0C7Q3	252 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	SDC1	P18827	310 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	DIO3	P55073	304 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	OCA2	Q04671	838 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	VWA2	Q5GFL6	755 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	OR51Q1	Q8NH59	317 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	CDC26	Q8NHZ8	85 aa		20.7	■□□□□ 0.9
LTBP4-227	ENST00000600026	C16orf78	Q8WTQ4	265 aa		20.7	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms