RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LDB3O75112 727 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ATP6AP2O75787 350 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 KRT38O76015 456 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ZWINTO95229 277 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 NADKO95544 446 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 P04436 131 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 IVDP26440 423 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ACVR2AP27037 513 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ZFP36L2P47974 494 aaKnown RBP9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 SLC6A12P48065 614 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ARL4CP56559 192 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 TGM3Q08188 693 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 MGAT5Q09328 741 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 EFTUD2Q15029 972 aaKnown RBP eCLIP9.79□□□□□ -0.841e-5■■■□□ 16.7
CHMP2A-202ENST00000596708 TGFBIQ15582 683 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 HIST2H2ACQ16777 129 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 FBXO48Q5FWF7 155 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 STEAP4Q687X5 459 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 HIST2H2AA3Q6FI13 130 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ABHD17CQ6PCB6 329 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 B3GNT6Q6ZMB0 384 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 RTL4Q6ZR62 310 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 FAM47EQ6ZV65 393 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 FAM109AQ8N4B1 249 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 TMEM251Q8N6I4 163 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF321PQ8N8H1 164 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 SNX31Q8N9S9 440 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 OR5L2Q8NGL0 311 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 OR14A16Q8NHC5 309 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 PTPMT1Q8WUK0 201 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ANKRD49Q8WVL7 239 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 LRRC39Q96DD0 335 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 SCYL1Q96KG9 808 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 RUNDC3BQ96NL0 473 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 F2RL3Q96RI0 385 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 TTYH2Q9BSA4 534 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 PITHD1Q9GZP4 211 aaPredicted RBP9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ZDHHC11Q9H8X9 412 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 IL1RL2Q9HB29 575 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 SACM1LQ9NTJ5 587 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 DNAJC11Q9NVH1 559 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 GPRC5BQ9NZH0 403 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 VTI1BQ9UEU0 232 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ACAD8Q9UKU7 415 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 LIPGQ9Y5X9 500 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 ZFHX3Q15911 3703 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 EXPH5Q8NEV8 1989 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 DOCK7Q96N67 2140 aa9.79□□□□□ -0.84
CHMP2A-202ENST00000596708 OR14I1A6ND48 311 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 CYR61O00622 381 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 CES2O00748 559 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 TAPBPO15533 448 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 TBX6O95947 436 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 MAGEA5P43359 124 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 HSPA7P48741 367 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 DNASE1L1P49184 302 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 MAN2A2P49641 1150 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 RNF4P78317 190 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 ID2Q02363 134 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 PDIA2Q13087 525 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SERTAD2Q14140 314 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SLC10A1Q14973 349 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 ADPRMQ3LIE5 342 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 ADNP2Q6IQ32 1131 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 OPN5Q6U736 354 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 CAPN12Q6ZSI9 719 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 TRILQ7L0X0 811 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 KLHL7Q8IXQ5 586 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 TCAIMQ8N3R3 496 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 GOLM1Q8NBJ4 401 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 FBXO36Q8NEA4 188 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SRFBP1Q8NEF9 429 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SLC2A12Q8TD20 617 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 NRGNQ92686 78 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SLCO2A1Q92959 643 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 KIAA1191Q96A73 305 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 ESAMQ96AP7 390 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 PTCD3Q96EY7 689 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 CAPZA3Q96KX2 299 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SGCZQ96LD1 299 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 WDR83Q9BRX9 315 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 CNOT10Q9H9A5 744 aaKnown RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 PRDM7Q9NQW5 492 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 TUBA8Q9NY65 449 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF490Q9ULM2 529 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SNX12Q9UMY4 172 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 SPACA6W5XKT8 324 aa9.78□□□□□ -0.84
CHMP2A-202ENST00000596708 KIAA1549Q9HCM3 1950 aa9.77□□□□□ -0.84
CHMP2A-202ENST00000596708 A0A0G2JNJ9 132 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 CCNT2O60583 730 aaKnown RBP9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 SH3BGRLO75368 114 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 STK16O75716 305 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 GLSO94925 669 aaPredicted RBP9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 IGHG3P01860 377 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 GLI4P10075 376 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 COX7A2P14406 83 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 CPN2P22792 545 aa9.77□□□□□ -0.85
CHMP2A-202ENST00000596708 DNAJA1P31689 397 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms