RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TRBC2A0A5B9 178 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 KMOO15229 486 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 RPN2P04844 631 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 LCKP06239 509 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 ACVR2AP27037 513 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 SOX9P48436 509 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 MANFP55145 182 aaKnown RBP21.61■■□□□ 1.05
SRRM1-222ENST00000596378 REEP5Q00765 189 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 MICAQ29983 383 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 ABHD11Q8NFV4 315 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 NDNFQ8TB73 568 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 GEMIN6Q8WXD5 167 aaKnown RBP21.61■■□□□ 1.05
SRRM1-222ENST00000596378 SMPDL3AQ92484 453 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 RAB8BQ92930 207 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 TEX101Q9BY14 249 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 GDE1Q9NZC3 331 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 ICKQ9UPZ9 632 aa21.61■■□□□ 1.05
SRRM1-222ENST00000596378 CAPN5O15484 640 aaPredicted RBP21.6■■□□□ 1.05
SRRM1-222ENST00000596378 B4GALT2O60909 372 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 DNAJB5O75953 348 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 BCHEP06276 602 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 SEC13P55735 322 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 CCDC103Q8IW40 242 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 MIPOL1Q8TD10 442 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 BORCS5Q969J3 196 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 RSPO3Q9BXY4 272 aaPredicted RBP21.6■■□□□ 1.05
SRRM1-222ENST00000596378 IMP3Q9NV31 184 aaKnown RBP21.6■■□□□ 1.05
SRRM1-222ENST00000596378 SELENONQ9NZV5 590 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 PDPK1O15530 556 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 SEMA3DO95025 777 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 GABARAPO95166 117 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 GGT2P36268 569 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 SLC19A1P41440 591 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 XCR1P46094 333 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 RXRGP48443 463 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 IDH2P48735 452 aaKnown RBP21.6■■□□□ 1.05
SRRM1-222ENST00000596378 C21orf59P57076 290 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 ADPRMQ3LIE5 342 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 YIPF6Q96EC8 236 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 MACROD1Q9BQ69 325 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 ACER3Q9NUN7 267 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 PCDHGA2Q9Y5H1 932 aa21.6■■□□□ 1.05
SRRM1-222ENST00000596378 WASHC1A8K0Z3 465 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 FAM227AF5H4B4 570 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 TOR1BO14657 336 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 NDUFS4O43181 175 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 VBP1P61758 197 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 MVKQ03426 396 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 WASH2PQ6VEQ5 465 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 UBE3DQ7Z6J8 389 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 SLC38A5Q8WUX1 472 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 GTPBP3Q969Y2 492 aaKnown RBP21.59■■□□□ 1.05
SRRM1-222ENST00000596378 PLEKHA8Q96JA3 519 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 PIP5K1AQ99755 562 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 RSPH9Q9H1X1 276 aaPredicted RBP21.59■■□□□ 1.05
SRRM1-222ENST00000596378 MTIF3Q9H2K0 278 aaKnown RBP21.59■■□□□ 1.05
SRRM1-222ENST00000596378 TRPV4Q9HBA0 871 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 SLC6A14Q9UN76 642 aa21.59■■□□□ 1.05
SRRM1-222ENST00000596378 YBX2Q9Y2T7 364 aaKnown RBP21.59■■□□□ 1.05
SRRM1-222ENST00000596378 IGKV1-8A0A0C4DH67 115 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 PFDN1O60925 122 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 CXCR2P25025 360 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 PBX2P40425 430 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 DGKEP52429 567 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 NUDT6P53370 316 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 SYT6Q5T7P8 510 aaPredicted RBP21.58■■□□□ 1.05
SRRM1-222ENST00000596378 SAXO2Q658L1 398 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 P3H2Q8IVL5 708 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 NLGN4XQ8N0W4 816 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 PROX1Q92786 737 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 OBP2AQ9NY56 170 aa21.58■■□□□ 1.05
SRRM1-222ENST00000596378 HOXB3P14651 431 aaPredicted RBP21.58■■□□□ 1.04
SRRM1-222ENST00000596378 ITGA2P17301 1181 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 C21orf33P30042 268 aaPredicted RBP21.58■■□□□ 1.04
SRRM1-222ENST00000596378 CSNK1G2P78368 415 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 ELOAQ14241 798 aaKnown RBP21.58■■□□□ 1.04
SRRM1-222ENST00000596378 PUM1Q14671 1186 aaKnown RBP eCLIP21.58■■□□□ 1.045e-11■■■□□ 15.9
SRRM1-222ENST00000596378 REEP3Q6NUK4 255 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 PRSS48Q7RTY5 328 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 ARMC8Q8IUR7 673 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 YAF2Q8IY57 180 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 UTP15Q8TED0 518 aaKnown RBP21.58■■□□□ 1.04
SRRM1-222ENST00000596378 NEURL3Q96EH8 262 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 AICDAQ9GZX7 198 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 SLC6A17Q9H1V8 727 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 SIRT3Q9NTG7 399 aaPredicted RBP21.58■■□□□ 1.04
SRRM1-222ENST00000596378 TBC1D23Q9NUY8 699 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 RHBDL2Q9NX52 303 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 SPATA7Q9P0W8 599 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 MOSPD1Q9UJG1 213 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 MYO9BQ13459 2157 aa21.58■■□□□ 1.04
SRRM1-222ENST00000596378 OR52A4PA6NMU1 304 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 PRKRAO75569 313 aaKnown RBP21.57■■□□□ 1.04
SRRM1-222ENST00000596378 PTGER1P34995 402 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 TGFBR1P36897 503 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 ERVK-21P61565 698 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 HEPACAMQ14CZ8 416 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 PAGE2Q7Z2X7 111 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 P2RY8Q86VZ1 359 aa21.57■■□□□ 1.04
SRRM1-222ENST00000596378 NUDT13Q86X67 352 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms