RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CERS2Q96G23 380 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 MS4A14Q96JA4 679 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 FAR2Q96K12 515 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 SGCZQ96LD1 299 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 CNPPD1Q9BV87 410 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 CLEC4MQ9H2X3 399 aaPredicted RBP9.22□□□□□ -0.93
LIG1-209ENST00000596104 GSX1Q9H4S2 264 aaPredicted RBP9.22□□□□□ -0.93
LIG1-209ENST00000596104 SEMA4BQ9NPR2 832 aaPredicted RBP9.22□□□□□ -0.93
LIG1-209ENST00000596104 TUBA8Q9NY65 449 aaPredicted RBP9.22□□□□□ -0.93
LIG1-209ENST00000596104 CRIM1Q9NZV1 1036 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 VTI1BQ9UEU0 232 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 DAPP1Q9UN19 280 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 MRPS33Q9Y291 106 aaKnown RBP9.22□□□□□ -0.93
LIG1-209ENST00000596104 PLEKHA6Q9Y2H5 1048 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 ATG4BQ9Y4P1 393 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 CLCA3PQ9Y6N3 262 aa9.22□□□□□ -0.93
LIG1-209ENST00000596104 A0A088AWK7 358 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 MYOCOSA0A1B0GUC4 107 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ATP6AP2A0A1C7CYW4 349 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 NPEPPSL1A6NEC2 478 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 HCN1O60741 890 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 PRAMEF4O60810 478 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 CLEC3AO75596 197 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ATP6AP2O75787 350 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 IFNA16P05015 189 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 GNAZP19086 355 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ZNF10P21506 573 aaPredicted RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 CERS1P27544 350 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 GDF5P43026 501 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 KIR2DL3P43628 341 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SLC6A12P48065 614 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 MAN2A2P49641 1150 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 PLA2G16P53816 162 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 RNF4P78317 190 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SLC10A1Q14973 349 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 C18orf21Q32NC0 220 aaPredicted RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 WLSQ5T9L3 541 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 PRAMEF9Q5VWM5 478 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ADNP2Q6IQ32 1131 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ABHD17CQ6PCB6 329 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 TRMT10BQ6PF06 316 aaKnown RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 ADGRD1Q6QNK2 874 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 OPN5Q6U736 354 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 FAM47EQ6ZV65 393 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SEM1Q6ZVN7 128 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 WDR53Q7Z5U6 358 aaPredicted RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 CDC20BQ86Y33 519 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 RELL2Q8NC24 303 aaPredicted RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 OR2L5Q8NG80 312 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 OR14A16Q8NHC5 309 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ANKRD7Q92527 254 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SARAFQ96BY9 339 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 MBD6Q96DN6 1003 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 PWWP2AQ96N64 755 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ALPK1Q96QP1 1244 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SERINC2Q96SA4 455 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 WDR83Q9BRX9 315 aaKnown RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 NAT9Q9BTE0 207 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ALOXE3Q9BYJ1 711 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 OR8D2Q9GZM6 311 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 NT5DC2Q9H857 520 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SH2D2AQ9NP31 389 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 SACM1LQ9NTJ5 587 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 B4GALT7Q9UBV7 327 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ACAD8Q9UKU7 415 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 OARD1Q9Y530 152 aa9.21□□□□□ -0.94
LIG1-209ENST00000596104 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.94
LIG1-209ENST00000596104 DNAJC13O75165 2243 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 TRGV5A0A0B4J1U4 118 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 LRRC3CA6NJW4 275 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 A6NNC1 897 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 FAM47E-STBD1D6RA91 191 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 SYT5O00445 386 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
LIG1-209ENST00000596104 WDR47O94967 919 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 ETHE1O95571 254 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 P04436 131 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 GABRA1P14867 456 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 FOSL1P15407 271 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 DNASE1P24855 282 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 PIGAP37287 484 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 FNTAP49354 379 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 HNMTP50135 292 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 MTTPP55157 894 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 ADAM8P78325 824 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 EFTUD2Q15029 972 aaKnown RBP eCLIP9.2□□□□□ -0.94
LIG1-209ENST00000596104 TSNQ15631 228 aaKnown RBP9.2□□□□□ -0.94
LIG1-209ENST00000596104 MPEG1Q2M385 716 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 ZNF791Q3KP31 576 aaPredicted RBP9.2□□□□□ -0.94
LIG1-209ENST00000596104 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 PIGGQ5H8A4 983 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 TRIM40Q6P9F5 258 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 LYPD8Q6UX82 237 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 OR5L2Q8NGL0 311 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 SLC2A12Q8TD20 617 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 ANKRD49Q8WVL7 239 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 CCT6BQ92526 530 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 RHBDF1Q96CC6 855 aa9.2□□□□□ -0.94
LIG1-209ENST00000596104 RMND5BQ96G75 393 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms