RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 AP5B1Q2VPB7 878 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 DEPDC1Q5TB30 811 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 FAM180AQ6UWF9 173 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 ZGRF1Q86YA3 2104 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 NFAM1Q8NET5 270 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-205ENST00000595028 OR52B6Q8NGF0 335 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 GRHL3Q8TE85 626 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 MTERF1Q99551 399 aaKnown RBP14.13□□□□□ -0.15
TRIM28-205ENST00000595028 MAPKAP1Q9BPZ7 522 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 CENPKQ9BS16 269 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 OR51B5Q9H339 312 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 NOL11Q9H8H0 719 aaKnown RBP14.13□□□□□ -0.15
TRIM28-205ENST00000595028 STMN3Q9NZ72 180 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 ABI3Q9P2A4 366 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 RNF11Q9Y3C5 154 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 SPACA6W5XKT8 324 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 CELSR1Q9NYQ6 3014 aa14.13□□□□□ -0.15
TRIM28-205ENST00000595028 SYNDIG1LA6NDD5 238 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 A8MT66 165 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 A8MUA0 341 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 MAN1A2O60476 641 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 MYO1DO94832 1006 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 CLDN9O95484 217 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 PPP2R1BP30154 601 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 ARL1P40616 181 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-205ENST00000595028 CCNG1P51959 295 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 RAP1GDS1P52306 607 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 ZRSR2Q15696 482 aaKnown RBP14.12□□□□□ -0.15
TRIM28-205ENST00000595028 CLNKQ7Z7G1 428 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 LCA5Q86VQ0 697 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 TMEM151AQ8N4L1 468 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 B3GNT7Q8NFL0 401 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 WDR20Q8TBZ3 569 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 NSUN5Q96P11 429 aaKnown RBP14.12□□□□□ -0.15
TRIM28-205ENST00000595028 CDK15Q96Q40 435 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 SORBS1Q9BX66 1292 aaKnown RBP14.12□□□□□ -0.15
TRIM28-205ENST00000595028 ZBTB26Q9HCK0 441 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 ADAP2Q9NPF8 381 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 KCMF1Q9P0J7 381 aa14.12□□□□□ -0.15
TRIM28-205ENST00000595028 ADGRG4Q8IZF6 3080 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ANKUB1A6NFN9 424 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 GABRR3A8MPY1 467 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 PLPP1O14494 284 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 PRAMEF2O60811 474 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 CBX6O95503 412 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ARFIP1P53367 373 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 TUBA3CQ13748 450 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 GGTA1PQ4G0N0 100 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 OR4C11Q6IEV9 310 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 TUBA3EQ6PEY2 450 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ZCCHC7Q8N3Z6 543 aaKnown RBP14.11□□□□□ -0.15
TRIM28-205ENST00000595028 APCDD1LQ8NCL9 501 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ST6GALNAC3Q8NDV1 305 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 SUN3Q8TAQ9 357 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ZNF483Q8TF39 744 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-205ENST00000595028 MZB1Q8WU39 189 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 FAR1Q8WVX9 515 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ATP6V1E2Q96A05 226 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 RGMAQ96B86 450 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 TAAR6Q96RI8 345 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 SLX1AQ9BQ83 275 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 NTMT1Q9BV86 223 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 C1QTNF3Q9BXJ4 246 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 ZNF717Q9BY31 904 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-205ENST00000595028 SEMA4BQ9NPR2 832 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-205ENST00000595028 PNO1Q9NRX1 252 aaKnown RBP14.11□□□□□ -0.15
TRIM28-205ENST00000595028 PPT2Q9UMR5 302 aa14.11□□□□□ -0.15
TRIM28-205ENST00000595028 PPIEQ9UNP9 301 aaKnown RBP14.11□□□□□ -0.15
TRIM28-205ENST00000595028 TRBV11-1A0A0K0K1C0 115 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 CTNSO60931 367 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 ETHE1O95571 254 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 EDN3P14138 238 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 CPN2P22792 545 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 PTX3P26022 381 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 TNFRSF17Q02223 184 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 CUL3Q13618 768 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 ELAVL1Q15717 326 aaKnown RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 C10orf62Q5T681 223 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 FRG2Q64ET8 278 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 MAMDC2Q7Z304 686 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 RPS19BP1Q86WX3 136 aaKnown RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 SRRM1Q8IYB3 904 aaKnown RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 ARMC10Q8N2F6 343 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 BCORP1Q8N888 145 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 MDS2Q8NDY4 140 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 VMP1Q96GC9 406 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 FRG2BQ96QU4 278 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 UTP23Q9BRU9 249 aaKnown RBP14.1□□□□□ -0.15
TRIM28-205ENST00000595028 OLAHQ9NV23 265 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 ANKRD10Q9NXR5 420 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 TMEM216Q9P0N5 145 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 TBK1Q9UHD2 729 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 FBXW2Q9UKT8 454 aa14.1□□□□□ -0.15
TRIM28-205ENST00000595028 APCP25054 2843 aa14.09□□□□□ -0.15
TRIM28-205ENST00000595028 A0A0A6YYD5 115 aa14.09□□□□□ -0.15
TRIM28-205ENST00000595028 GOLGA8RI6L899 631 aa14.09□□□□□ -0.15
TRIM28-205ENST00000595028 FOXE1O00358 373 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-205ENST00000595028 CDK2AP1O14519 115 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms