RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LYPLA1O75608 230 aaPredicted RBP18.55■□□□□ 0.56
LSM4-203ENST00000593829 SUPT7LO94864 414 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 KLHL18O94889 574 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 PCNAP12004 261 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 SERPINB1P30740 379 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 IL10RAQ13651 578 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 ATP1A1-AS1Q5TC04 95 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 LPCAT4Q643R3 524 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 ADNP2Q6IQ32 1131 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 RPS27LQ71UM5 84 aaKnown RBP18.55■□□□□ 0.56
LSM4-203ENST00000593829 VN1R5Q7Z5H4 357 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 ICA1LQ8NDH6 482 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 OR7G3Q8NG95 312 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 UTP15Q8TED0 518 aaKnown RBP18.55■□□□□ 0.56
LSM4-203ENST00000593829 KLHL31Q9H511 634 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 MKKSQ9NPJ1 570 aaPredicted RBP18.55■□□□□ 0.56
LSM4-203ENST00000593829 PTTG2Q9NZH5 202 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 ADGRE2Q9UHX3 823 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 RNF11Q9Y3C5 154 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 PCDHGA11Q9Y5H2 935 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 CACNA1BQ00975 2339 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 IGLV3-12A0A075B6K2 115 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 VSTM2BA6NLU5 285 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 SGK494L7N484 410 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 CDH13P55290 713 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 SSPNQ14714 243 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 RBBP7Q16576 425 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 DEFB134Q4QY38 66 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 LRRC23Q53EV4 343 aaPredicted RBP18.55■□□□□ 0.56
LSM4-203ENST00000593829 UNC50Q53HI1 259 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 FAM81AQ8TBF8 368 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 STT3BQ8TCJ2 826 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 REPS1Q96D71 796 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 DGCR14Q96DF8 476 aaKnown RBP18.55■□□□□ 0.56
LSM4-203ENST00000593829 L3HYPDHQ96EM0 354 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 SPSB2Q99619 263 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 Q9H521 79 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 MID2Q9UJV3 735 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 H0YIV9 168 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 GALR3O60755 368 aaPredicted RBP18.54■□□□□ 0.56
LSM4-203ENST00000593829 OTCP00480 354 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 FURINP09958 794 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 ZGLP1P0C6A0 271 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 SMIM18P0DKX4 95 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 SMIM10L1P0DMW3 83 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 COX4I1P13073 169 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 CPA3P15088 417 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 FOXL2P58012 376 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 RAB8AP61006 207 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 CLCQ05315 142 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 TBL3Q12788 808 aaKnown RBP18.54■□□□□ 0.56
LSM4-203ENST00000593829 TRIP10Q15642 601 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 CPSF6Q16630 551 aaKnown RBP eCLIP18.54■□□□□ 0.56
LSM4-203ENST00000593829 DEFB107AQ8IZN7 70 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 POU5F2Q8N7G0 328 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 CATSPER1Q8NEC5 780 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 GAL3ST3Q96A11 431 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 SMIM10Q96HG1 83 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 CDK15Q96Q40 435 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 AICDAQ9GZX7 198 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 SOX17Q9H6I2 414 aaPredicted RBP18.54■□□□□ 0.56
LSM4-203ENST00000593829 RAB26Q9ULW5 256 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 TSC22D4Q9Y3Q8 395 aa18.54■□□□□ 0.56
LSM4-203ENST00000593829 SLC22A2O15244 555 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 RDH16O75452 317 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 ITGB2P05107 769 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 MAT1AQ00266 395 aaKnown RBP18.53■□□□□ 0.56
LSM4-203ENST00000593829 RHDQ02161 417 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 TRAF3Q13114 568 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 SYT16Q17RD7 645 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 ADPRMQ3LIE5 342 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 EPGNQ6UW88 154 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 MILR1Q7Z6M3 343 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 SPATA24Q86W54 205 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 RAB43Q86YS6 212 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 C10orf107Q8IVU9 208 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 TRPC4APQ8TEL6 797 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 THAP4Q8WY91 577 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 MS4A6EQ96DS6 147 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 MAGEB10Q96LZ2 347 aaPredicted RBP18.53■□□□□ 0.56
LSM4-203ENST00000593829 TGIF2Q9GZN2 237 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 REXO4Q9GZR2 422 aaKnown RBP18.53■□□□□ 0.56
LSM4-203ENST00000593829 ACSS2Q9NR19 701 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 PNPOQ9NVS9 261 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 POLHQ9Y253 713 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 DTNAQ9Y4J8 743 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 A0A1B0GVG6 124 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 TMEM114B3SHH9 223 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 FFAR3O14843 346 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 GPR42O15529 346 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 ERI3O43414 337 aaKnown RBP18.53■□□□□ 0.56
LSM4-203ENST00000593829 PDE5AO76074 875 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 TBX6O95947 436 aaPredicted RBP18.53■□□□□ 0.56
LSM4-203ENST00000593829 UMODP07911 640 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 PIK3CBP42338 1070 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 RPL5P46777 297 aaKnown RBP18.53■□□□□ 0.56
LSM4-203ENST00000593829 HK2P52789 917 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 FOLH1Q04609 750 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 DEFB109BQ30KR1 87 aa18.53■□□□□ 0.56
LSM4-203ENST00000593829 VWA2Q5GFL6 755 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms