RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PLCL2Q9UPR0 1127 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 SLC22A7Q9Y694 548 aa12.77□□□□□ -0.37
VMP1-217ENST00000593168 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 C15orf38-AP3S2A0A0A6YYH1 394 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 A0A0G2JN53 185 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 PRSS51A0A1B0GVH4 220 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 C4orf51C9J302 202 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 H0YHG0 523 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 SCN2BO60939 215 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ERN1O75460 977 aaKnown RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 RFPL3O75679 317 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 KCNH1O95259 989 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 LDOC1O95751 146 aaPredicted RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 EIF2S1P05198 315 aaKnown RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 FAM58BPP0C7Q3 252 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ZNF888P0CJ79 500 aaPredicted RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 LAMP1P11279 417 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 DRD2P14416 443 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ALOX12P18054 663 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 DDCP20711 480 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ZNF10P21506 573 aaPredicted RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 CSF2RBP32927 897 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 MTTPP55157 894 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 WNT3P56703 355 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 VSX2P58304 361 aaPredicted RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 RAB8AP61006 207 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
VMP1-217ENST00000593168 SLAMF1Q13291 335 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 PRTGQ2VWP7 1150 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 PERM1Q5SV97 790 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 OR4F3Q6IEY1 312 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 TMEM214Q6NUQ4 689 aaKnown RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 LRRC69Q6ZNQ3 347 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 USP53Q70EK8 1073 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ARPINQ7Z6K5 226 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 DHDDSQ86SQ9 333 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ULK2Q8IYT8 1036 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ZNF843Q8N446 348 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 AMER3Q8N944 861 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 VPS37AQ8NEZ2 397 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 OR8K5Q8NH50 307 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 KLHL6Q8WZ60 621 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 PPCDCQ96CD2 204 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 SERINC2Q96SA4 455 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 DPYSL5Q9BPU6 564 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 FAIM2Q9BWQ8 316 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 COPS7BQ9H9Q2 264 aaPredicted RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 SPAG4Q9NPE6 437 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ENAMQ9NRM1 1142 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 TAS2R7Q9NYW3 318 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 PDP2Q9P2J9 529 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 BTNL2Q9UIR0 455 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 ASB4Q9Y574 426 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 AK5Q9Y6K8 562 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.76□□□□□ -0.37
VMP1-217ENST00000593168 RP1P56715 2156 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 PTPRQQ9UMZ3 2332 aa12.76□□□□□ -0.37
VMP1-217ENST00000593168 HCRTR1O43613 425 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 RASSF9O75901 435 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 CPNE6O95741 557 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 SLC6A2P23975 617 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 TRPC1P48995 793 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 BTN3A2P78410 334 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 HSD11B2P80365 405 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 DAB2P98082 770 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 MC1RQ01726 317 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 SPATS1Q496A3 300 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 PIGGQ5H8A4 983 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 TCTE1Q5JU00 501 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 LRIF1Q5T3J3 769 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 HES3Q5TGS1 186 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 FBXW8Q8N3Y1 598 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 LRRN3Q9H3W5 708 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 IL1RL2Q9HB29 575 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 SERHLQ9NQF3 203 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 MIEF1Q9NQG6 463 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 LYARQ9NX58 379 aaKnown RBP12.75□□□□□ -0.37
VMP1-217ENST00000593168 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 SLAMF8Q9P0V8 285 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 TMEM181Q9P2C4 612 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 ABCD2Q9UBJ2 740 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 KLHL3Q9UH77 587 aa12.75□□□□□ -0.37
VMP1-217ENST00000593168 KNTC1P50748 2209 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 A0A096LPI6 279 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 A0A1W2PQM1 296 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 RNASET2O00584 256 aaKnown RBP12.74□□□□□ -0.37
VMP1-217ENST00000593168 B3GALT2O43825 422 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 MSL3P1P0C860 447 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
VMP1-217ENST00000593168 ARL4DP49703 201 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 EMP3P54852 163 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ELF3P78545 371 aaPredicted RBP12.74□□□□□ -0.37
VMP1-217ENST00000593168 CCL7P80098 99 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 RTP5Q14D33 572 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 NDUFA9Q16795 377 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms