RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 DMRT3Q9NQL9 472 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 SIRT5Q9NXA8 310 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 GIMAP2Q9UG22 337 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 MAPRE3Q9UPY8 281 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 RUVBL1Q9Y265 456 aaKnown RBP11.27□□□□□ -0.61
DDX39A-219ENST00000592927 CFAP73A6NFT4 308 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 MAGEB17A8MXT2 336 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 STMND1H3BQB6 276 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 P2RX6O15547 441 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 CLEC3AO75596 197 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 MYO1DO94832 1006 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 LIPCP11150 499 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 ZNF28P17035 718 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 ALAS2P22557 587 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 EMP3P54852 163 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 DIO3P55073 304 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 RPS13P62277 151 aaKnown RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 ACTN3Q08043 901 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 CUL3Q13618 768 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 DDX39BQ13838 428 aaKnown RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 NDUFA9Q16795 377 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 SPRED3Q2MJR0 410 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 MUM1Q2TAK8 710 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 RFTN2Q52LD8 501 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 AGKQ53H12 422 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 GARNL3Q5VVW2 1013 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 IL23RQ5VWK5 629 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 CYP20A1Q6UW02 462 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 C6orf15Q6UXA7 325 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 TTLL10Q6ZVT0 673 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 ASRGL1Q7L266 308 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 GLB1L3Q8NCI6 653 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 KLHL29Q96CT2 875 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 SLC7A6OSQ96CW6 309 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 MTERF1Q99551 399 aaKnown RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 MACROD1Q9BQ69 325 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 CUTCQ9NTM9 273 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 NDE1Q9NXR1 346 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 AHSPQ9NZD4 102 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 NDOR1Q9UHB4 597 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 TMEM184BQ9Y519 407 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 POLR3HQ9Y535 204 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
DDX39A-219ENST00000592927 KIF26BQ2KJY2 2108 aa11.26□□□□□ -0.61
DDX39A-219ENST00000592927 ICE1Q9Y2F5 2266 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 URADA6NGE7 173 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 BBIP1A8MTZ0 92 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 B2RBV5 119 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 DSCR3O14972 297 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SLC22A3O75751 556 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SEMA3DO95025 777 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 KLK3P07288 261 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SNRPB2P08579 225 aaKnown RBP11.25□□□□□ -0.61
DDX39A-219ENST00000592927 CCNYL3P0C7X3 344 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 JAK1P23458 1154 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 DCTP40126 519 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 CD97P48960 835 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 ARFIP1P53367 373 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 POLE2P56282 527 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 ACSM2AQ08AH3 577 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 DNAL1Q4LDG9 190 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 COQ5Q5HYK3 327 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 FHL5Q5TD97 284 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 C1orf189Q5VU69 101 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 ACSM2BQ68CK6 577 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 RHBDD2Q6NTF9 364 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 GALNT18Q6P9A2 607 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 BORAQ6PGQ7 559 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SNX32Q86XE0 403 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SLC38A9Q8NBW4 561 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 KCT2Q8NC54 265 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 GALNT6Q8NCL4 622 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 CREB3L4Q8TEY5 395 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SSC4DQ8WTU2 575 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 CHTF18Q8WVB6 975 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 CENPKQ9BS16 269 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 BTBD10Q9BSF8 475 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 C1orf50Q9BV19 199 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 SPRY4Q9C004 299 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 EFCAB1Q9HAE3 211 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 ZNF71Q9NQZ8 489 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-219ENST00000592927 CCDC167Q9P0B6 97 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 DHCR7Q9UBM7 475 aaKnown RBP11.25□□□□□ -0.61
DDX39A-219ENST00000592927 ACSL6Q9UKU0 697 aa11.25□□□□□ -0.61
DDX39A-219ENST00000592927 LOC100653049A0A140TA62 436 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 A0A1B0GX78 115 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 FAM234BA2RU67 622 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-219ENST00000592927 MEN1O00255 615 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 RAD1O60671 282 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 PRMT3O60678 531 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 KRT34O76011 436 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 DLGAP3O95886 979 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 G6PDP11413 515 aa11.24□□□□□ -0.61
DDX39A-219ENST00000592927 BCKDHAP12694 445 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms