RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SNX8Q9Y5X2 465 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 SNX5Q9Y5X3 404 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 SNRNP200O75643 2136 aaKnown RBP14.98□□□□□ -0.01
MBD1-227ENST00000592060 A0A1W2PPW3 197 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 OR52A4PA6NMU1 304 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 IFNA14P01570 189 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 DNTTP04053 509 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 DDX5P17844 614 aaKnown RBP14.98□□□□□ -0.01
MBD1-227ENST00000592060 BCL6P41182 706 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 XCR1P46094 333 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 PXNP49023 591 aaPredicted RBP14.98□□□□□ -0.01
MBD1-227ENST00000592060 PPP2CBP62714 309 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 TRA2BP62995 288 aaKnown RBP14.98□□□□□ -0.01
MBD1-227ENST00000592060 PPP2CAP67775 309 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 SLC35A2P78381 396 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 UAP1L1Q3KQV9 507 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 ZNF605Q86T29 641 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 ARMC8Q8IUR7 673 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 IL17RCQ8NAC3 791 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 FBRSQ9HAH7 460 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 PREBQ9HCU5 417 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 MSRAQ9UJ68 235 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 GPSM3Q9Y4H4 160 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 SNX11Q9Y5W9 270 aa14.98□□□□□ -0.01
MBD1-227ENST00000592060 REV3LO60673 3130 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 PTGES3LE9PB15 166 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 PPM1DO15297 605 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 PEBP1P30086 187 aaKnown RBP14.97□□□□□ -0.01
MBD1-227ENST00000592060 MAT2AP31153 395 aaKnown RBP14.97□□□□□ -0.01
MBD1-227ENST00000592060 MANFP55145 182 aaKnown RBP14.97□□□□□ -0.01
MBD1-227ENST00000592060 RPP38P78345 283 aaKnown RBP14.97□□□□□ -0.01
MBD1-227ENST00000592060 SPIBQ01892 262 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 ADAM15Q13444 863 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 RPE65Q16518 533 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 FGD3Q5JSP0 725 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 OR4C11Q6IEV9 310 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 CEACAM20Q6UY09 585 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 ZNF793Q6ZN11 406 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 ADCK2Q7Z695 626 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 FAM20CQ8IXL6 584 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 TTLQ8NG68 377 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 OR10G2Q8NGC3 310 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 PSMA8Q8TAA3 256 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 UCN3Q969E3 161 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 FKBP10Q96AY3 582 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 EXOSC8Q96B26 276 aaKnown RBP14.97□□□□□ -0.01
MBD1-227ENST00000592060 HRASLS5Q96KN8 279 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 FGF22Q9HCT0 170 aa14.97□□□□□ -0.01
MBD1-227ENST00000592060 LRIT2A6NDA9 550 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 PDZK1P1A8MUH7 402 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 C4orf51C9J302 202 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 CACNB4O00305 520 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 NOL3O60936 208 aaKnown RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 ITGA2P17301 1181 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 LIMS1P48059 325 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 GP2P55259 537 aaKnown RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 CDH12P55289 794 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 RPS26P62854 115 aaKnown RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 HPCAP84074 193 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 HYAL2Q12891 473 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 RAB30Q15771 203 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 EXOC3L2Q2M3D2 409 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 CYP27C1Q4G0S4 372 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 REEP3Q6NUK4 255 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 SLC5A8Q8N695 610 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 RAB2BQ8WUD1 216 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 FAR1Q8WVX9 515 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 APOBEC4Q8WW27 367 aaKnown RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 DTNBP1Q96EV8 351 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 FEVQ99581 238 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 SLC28A3Q9HAS3 691 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 MRPS30Q9NP92 439 aaKnown RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 PRDM8Q9NQV8 689 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 ACSS1Q9NUB1 689 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 TAS2R7Q9NYW3 318 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 SCHIP1Q9P0W5 487 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 ERVK-18Q9QC07 812 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 MOSPD1Q9UJG1 213 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 RAB23Q9ULC3 237 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 TPRKBQ9Y3C4 175 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 A0A0G2JN53 185 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 A8MVJ9 347 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 J3KTA2 159 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 HAT1O14929 419 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 WBP4O75554 376 aaKnown RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 EGFP01133 1207 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 HOXB2P14652 356 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 CD247P20963 164 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 CD6P30203 668 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 MAPK10P53779 464 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 DLX2Q07687 328 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 NFATC3Q12968 1075 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 HSPB3Q12988 150 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 MLC1Q15049 377 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 MAPK11Q15759 364 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 ADPRMQ3LIE5 342 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 TMEM35AQ53FP2 167 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 TNFAIP8L2Q6P589 184 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms