RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZYG11AQ6WRX3 759 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 PAGE2Q7Z2X7 111 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 GPR180Q86V85 440 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 NUDT13Q86X67 352 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM151AQ8N4L1 468 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SLC5A8Q8N695 610 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 CDYL2Q8N8U2 506 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 C7orf57Q8NEG2 295 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 MYRIPQ8NFW9 859 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 OR1N1Q8NGS0 311 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 WDR20Q8TBZ3 569 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 METTL6Q8TCB7 284 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 CPT1CQ8TCG5 803 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 MZB1Q8WU39 189 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SMC6Q96SB8 1091 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SORBS1Q9BX66 1292 aaKnown RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 ALOXE3Q9BYJ1 711 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 DEFB126Q9BYW3 111 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 CENPHQ9H3R5 247 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 ZBTB20Q9HC78 741 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 ZBTB26Q9HCK0 441 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 LYARQ9NX58 379 aaKnown RBP9.45□□□□□ -0.9
BRCA1-227ENST00000591849 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 PLA2G3Q9NZ20 509 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 TRPS1Q9UHF7 1281 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 SLC12A4Q9UP95 1085 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 CLCA3PQ9Y6N3 262 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 COL12A1Q99715 3063 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 LRRK2Q5S007 2527 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 BSNQ9UPA5 3926 aa9.45□□□□□ -0.9
BRCA1-227ENST00000591849 FER1L5A0AVI2 2057 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 TCRBV16S1A1N1A0A5B0 115 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 PPP6CO00743 305 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 PLPP1O14494 284 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 PLIN3O60664 434 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 GUCY1B2O75343 617 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 VPS4BO75351 444 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 ULK1O75385 1050 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 ERLIN1O75477 346 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 MYO1DO94832 1006 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 PROCP04070 461 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 COX7A2P14406 83 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 PPP2R1BP30154 601 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 BUD31P41223 144 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 ARFIP1P53367 373 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 PKNOX1P55347 436 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 ID2Q02363 134 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 OC90Q02509 493 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 LCP2Q13094 533 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 SERTAD2Q14140 314 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 TLR1Q15399 786 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 INPP5JQ15735 1006 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 IGFBP7Q16270 282 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 MEP1AQ16819 746 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 KRT71Q3SY84 523 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 GGTA1PQ4G0N0 100 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 CCNYL2Q5T2Q4 361 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 FCRLBQ6BAA4 426 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 LETMD1Q6P1Q0 360 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF793Q6ZN11 406 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 SRRM1Q8IYB3 904 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM132CQ8N3T6 1108 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 ZCCHC7Q8N3Z6 543 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 CISD2Q8N5K1 135 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 RDH11Q8TC12 318 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 DAZLQ92904 295 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM237Q96Q45 408 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 CSF3RQ99062 836 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 C1QTNF3Q9BXJ4 246 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 CDCP1Q9H5V8 836 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 RPF2Q9H7B2 306 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 MMP25Q9NPA2 562 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 MID1IP1Q9NPA3 183 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 KCMF1Q9P0J7 381 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 VPS4AQ9UN37 437 aa9.44□□□□□ -0.9
BRCA1-227ENST00000591849 COPG1Q9Y678 874 aaKnown RBP9.44□□□□□ -0.9
BRCA1-227ENST00000591849 FLNCQ14315 2725 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 MED13Q9UHV7 2174 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 CCDC88CQ9P219 2028 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 IGKV3D-11A0A0A0MRZ8 115 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 TRAV17A0A0B4J275 112 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 SAGE2PA6NJ88 616 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 MANBAO00462 879 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 CYR61O00622 381 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 RGS16O15492 202 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 LDB3O75112 727 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 SPAG7O75391 227 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 EEDO75530 441 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 SEMA3DO95025 777 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 ESRRBO95718 433 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 F10P00742 488 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 PDYNP01213 254 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 ENO1P06733 434 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 KLK1P06870 262 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 FAM58BPP0C7Q3 252 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 SOX11P35716 441 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 CD97P48960 835 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 CLCN2P51788 898 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 NAGLUP54802 743 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms