RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 KCNK13Q9HB14 408 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 PNO1Q9NRX1 252 aaKnown RBP8.61□□□□□ -1.03
DNMT1-223ENST00000591239 PLA2G3Q9NZ20 509 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 STMN3Q9NZ72 180 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 TEKT2Q9UIF3 430 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF225Q9UK10 706 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 FBXW2Q9UKT8 454 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 EMCNQ9ULC0 261 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 GRID1Q9ULK0 1009 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CLDN16Q9Y5I7 305 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 SPACA6W5XKT8 324 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 RP1L1Q8IWN7 2480 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 SYNDIG1LA6NDD5 238 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 SAGE2PA6NJ88 616 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 G3V2L1 256 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 PLIN3O60664 434 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 EEDO75530 441 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 MYO1DO94832 1006 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 OR4F21O95013 312 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 MLYCDO95822 493 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 WDPCPO95876 746 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 PROCP04070 461 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 MYL2P10916 166 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 CPN2P22792 545 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 PPP2R1BP30154 601 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 BSGP35613 385 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 TNFSF10P50591 281 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ARG2P78540 354 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 IFFO1Q0D2I5 559 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF169Q14929 603 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 TLR1Q15399 786 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 TERF2Q15554 542 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 CCDC153Q494R4 210 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 SGO1Q5FBB7 561 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ACER2Q5QJU3 275 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 FCRLBQ6BAA4 426 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ZYG11AQ6WRX3 759 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 CLNKQ7Z7G1 428 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 GPR180Q86V85 440 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ZCCHC7Q8N3Z6 543 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 RIBC1Q8N443 379 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 KIF2BQ8N4N8 673 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 CISD2Q8N5K1 135 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 NFAM1Q8NET5 270 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 MYRIPQ8NFW9 859 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ELP5Q8TE02 316 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 CCDC126Q96EE4 140 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 L3HYPDHQ96EM0 354 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF354BQ96LW1 612 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF382Q96SR6 550 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 SERPINI1Q99574 410 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF717Q9BY31 904 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ALOXE3Q9BYJ1 711 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 RNF32Q9H0A6 362 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 C12orf65Q9H3J6 166 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ELOVL6Q9H5J4 265 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 DDX31Q9H8H2 851 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
DNMT1-223ENST00000591239 MS4A12Q9NXJ0 267 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 MAP10Q9P2G4 905 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 TRPS1Q9UHF7 1281 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 SNX6Q9UNH7 406 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 ATG4BQ9Y4P1 393 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 PCDHGA10Q9Y5H3 936 aa8.6□□□□□ -1.03
DNMT1-223ENST00000591239 A0A0A6YYD5 115 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 MYOCOSA0A1B0GUC4 107 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 BLACEA4D250 179 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 COPEO14579 308 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 PROM1O43490 865 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 TMPRSS11DO60235 418 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 LDB3O75112 727 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 SEMA3DO95025 777 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 F10P00742 488 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 PDYNP01213 254 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 GBAP04062 536 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 IFNA16P05015 189 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 FAM58BPP0C7Q3 252 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 TLX1P31314 330 aaPredicted RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 NAGLUP54802 743 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 HNRNPH2P55795 449 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 TAS2R50P59544 299 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 SLC18A2Q05940 514 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 STX4Q12846 297 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 SERTAD2Q14140 314 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 ELAVL1Q15717 326 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 MEP1AQ16819 746 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 C18orf63Q68DL7 685 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 MRM1Q6IN84 353 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CYP20A1Q6UW02 462 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 GPRIN3Q6ZVF9 776 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CRLF3Q8IUI8 442 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 C4orf33Q8N1A6 199 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 BEST3Q8N1M1 668 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 MREGQ8N565 214 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 SLC5A8Q8N695 610 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CCNYL1Q8N7R7 359 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CDYL2Q8N8U2 506 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms