RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 FAM227AF5H4B4 570 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 B4GALT2O60909 372 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 RGS9O75916 674 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 SASH3O75995 380 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 SCELO95171 688 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 RPS17P08708 135 aaKnown RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 ICAM2P13598 275 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 CERS1P27544 350 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 SERPINB1P30740 379 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 HPDP32754 393 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 PIK3CGP48736 1102 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 PLA2G16P53816 162 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 AP2B1P63010 937 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 BTG2P78543 158 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 INPP5JQ15735 1006 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 OCLNQ16625 522 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 HIST2H2ACQ16777 129 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 SFT2D3Q587I9 215 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 LIPJQ5W064 366 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 HIST2H2AA3Q6FI13 130 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 H3F3CQ6NXT2 135 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 TRIM40Q6P9F5 258 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 PAPD4Q6PIY7 484 aaKnown RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF793Q6ZN11 406 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 SIRT6Q8N6T7 355 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 L3MBTL4Q8NA19 623 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 TMEM52Q8NDY8 209 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 CPT1CQ8TCG5 803 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 FAR2Q96K12 515 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 SERINC2Q96SA4 455 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 MRPL46Q9H2W6 279 aaKnown RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 CLMPQ9H6B4 373 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 ANKZF1Q9H8Y5 726 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 ZBTB26Q9HCK0 441 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 PTGFRNQ9P2B2 879 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 PSMC3IPQ9P2W1 217 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-211ENST00000590499 PCTPQ9UKL6 214 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 MMACHCQ9Y4U1 282 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 HECTD1Q9ULT8 2610 aa10.51□□□□□ -0.73
SMAD4-211ENST00000590499 A0A088AWK7 358 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 A8MT66 165 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 H0YIV9 168 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 PSMD12O00232 456 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 CYR61O00622 381 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 OR7A17O14581 309 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 B3GALT2O43825 422 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF500O60304 480 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 MAOAP21397 527 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF10P21506 573 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 EEF1DP29692 281 aaKnown RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 PIK3CBP42338 1070 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 HNRNPFP52597 415 aaKnown RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 MTTPP55157 894 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 LIM2P55344 173 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 RAB38P57729 211 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 SLC26A5P58743 744 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 TRAF3Q13114 568 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 EXT1Q16394 746 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 TMEM35AQ53FP2 167 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 LGSNQ5TDP6 509 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 B3GNTL1Q67FW5 361 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 LINC00696Q6ZRV3 163 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 LCA5Q86VQ0 697 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 RNF175Q8N4F7 328 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 OR52B6Q8NGF0 335 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 HUS1BQ8NHY5 278 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 WDR20Q8TBZ3 569 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 M1APQ8TC57 530 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ADAMTS18Q8TE60 1221 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 PHF21BQ96EK2 531 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 SCYL1Q96KG9 808 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 PTCHD1Q96NR3 888 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 NSUN5Q96P11 429 aaKnown RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 KCNC2Q96PR1 638 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 CSF3RQ99062 836 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 LPAR4Q99677 370 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 BARD1Q99728 777 aaKnown RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 TBCDQ9BTW9 1192 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 C1QTNF3Q9BXJ4 246 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 RNF32Q9H0A6 362 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 EPS8L2Q9H6S3 715 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 IPPKQ9H8X2 491 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ACTR8Q9H981 624 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 MMP25Q9NPA2 562 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 SLAMF7Q9NQ25 335 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 DMRT3Q9NQL9 472 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 NECTIN3Q9NQS3 549 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 KCMF1Q9P0J7 381 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ADGRE2Q9UHX3 823 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 DAPP1Q9UN19 280 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ANGPTL3Q9Y5C1 460 aa10.5□□□□□ -0.73
SMAD4-211ENST00000590499 USP9YO00507 2555 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 SPTBN1Q01082 2364 aaKnown RBP10.5□□□□□ -0.73
SMAD4-211ENST00000590499 ZGRF1Q86YA3 2104 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 IQANK1A0A1B0GTG1 560 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 CLEC18AA5D8T8 446 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 RTCAO00442 366 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 SMIM24O75264 130 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms