RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 VSTM2BA6NLU5 285 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 FAM227AF5H4B4 570 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 PROM1O43490 865 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 B4GALT2O60909 372 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 JRKO75564 520 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 HEXBP07686 556 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 PRPS2P11908 318 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 BCKDHAP12694 445 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 SDC1P18827 310 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 PTPN4P29074 926 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 FOLR3P41439 243 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 ASMTP46597 345 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 SEC24CP53992 1094 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 TNFRSF17Q02223 184 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 CLN3Q13286 438 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 NDUFAF5Q5TEU4 345 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 OGFOD2Q6N063 350 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 UNQ6494/PRO21346Q6UXR6 183 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 SHISA6Q6ZSJ9 500 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
VMP1-210ENST00000589823 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 ZNF595Q8IYB9 648 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 TMEM132CQ8N3T6 1108 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 LIX1Q8N485 282 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 STON2Q8WXE9 905 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 TM4SF18Q96CE8 201 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 RILPQ96NA2 401 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 OR52B2Q96RD2 323 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 CSF3RQ99062 836 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 CRB3Q9BUF7 120 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 CCDC28BQ9BUN5 200 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
VMP1-210ENST00000589823 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 RPF2Q9H7B2 306 aaKnown RBP12.84□□□□□ -0.35
VMP1-210ENST00000589823 ASIC5Q9NY37 505 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 ADAM21Q9UKJ8 722 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 TCFL5Q9UL49 500 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 DLGAP4Q9Y2H0 992 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 WBP11Q9Y2W2 641 aaKnown RBP12.84□□□□□ -0.35
VMP1-210ENST00000589823 PCDHGA6Q9Y5G7 932 aa12.84□□□□□ -0.35
VMP1-210ENST00000589823 A0A1W2PR48 441 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 C1orf226A1L170 272 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 C1QTNF9BB2RNN3 333 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 CYR61O00622 381 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 TERTO14746 1132 aaKnown RBP12.83□□□□□ -0.36
VMP1-210ENST00000589823 RRP8O43159 456 aaKnown RBP12.83□□□□□ -0.36
VMP1-210ENST00000589823 KLK10O43240 276 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 CNOT3O75175 753 aaKnown RBP12.83□□□□□ -0.36
VMP1-210ENST00000589823 CDC123O75794 336 aaPredicted RBP12.83□□□□□ -0.36
VMP1-210ENST00000589823 AIFM1O95831 613 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 IL3P08700 152 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 C1QTNF9P0C862 333 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 ALDH9A1P49189 494 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 ARFIP2P53365 341 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 EMP2P54851 167 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 KLC1Q07866 573 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 C2orf80Q0P641 193 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 LSM12Q3MHD2 195 aaKnown RBP12.83□□□□□ -0.36
VMP1-210ENST00000589823 C18orf63Q68DL7 685 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 CGB2Q6NT52 195 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 IKBIPQ70UQ0 350 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 MED25Q71SY5 747 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 VASH2Q86V25 355 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 FAM9CQ8IZT9 166 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 OR2Y1Q8NGV0 311 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 TANKQ92844 425 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 TSSK3Q96PN8 268 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 SPSB2Q99619 263 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 EBF4Q9BQW3 602 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 TMEM120AQ9BXJ8 343 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 ACTL8Q9H568 366 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 MYNNQ9NPC7 610 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 PRTFDC1Q9NRG1 225 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 TEX10Q9NXF1 929 aaPredicted RBP12.83□□□□□ -0.36
VMP1-210ENST00000589823 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 C3orf18Q9UK00 162 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 MMACHCQ9Y4U1 282 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 PCDHA9Q9Y5H5 950 aa12.83□□□□□ -0.36
VMP1-210ENST00000589823 IDSB3KWA1 339 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 UBDO15205 165 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 PRMT3O60678 531 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 KLF7O75840 302 aaPredicted RBP12.82□□□□□ -0.36
VMP1-210ENST00000589823 IGHEP01854 428 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 CYC1P08574 325 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 G6PDP11413 515 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 DRD2P14416 443 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 LIFP15018 202 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 PCSK2P16519 638 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 DRD4P21917 467 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 F8A1P23610 371 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 TACR1P25103 407 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 PPP2R1BP30154 601 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 HSD17B7P56937 341 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 RPS18P62269 152 aaKnown RBP12.82□□□□□ -0.36
VMP1-210ENST00000589823 SF3A3Q12874 501 aaKnown RBP eCLIP12.82□□□□□ -0.36
VMP1-210ENST00000589823 SLC13A2Q13183 592 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 RPS6KA2Q15349 733 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 OR52E8Q6IFG1 317 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 FAM71E1Q6IPT2 247 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms