RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TBC1D20Q96BZ9 403 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 EGLN2Q96KS0 407 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 MARK4Q96L34 752 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 CATSPER2Q96P56 530 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 CSF3RQ99062 836 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 FAIM2Q9BWQ8 316 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 RBCK1Q9BYM8 510 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 TGIF2Q9GZN2 237 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 SLC26A1Q9H2B4 701 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 WDR41Q9HAD4 459 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 C14orf105Q9NVL8 296 aa14.32□□□□□ -0.12
ATG4D-211ENST00000589753 MRPS33Q9Y291 106 aaKnown RBP14.32□□□□□ -0.12
ATG4D-211ENST00000589753 KNTC1P50748 2209 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 C1orf226A1L170 272 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 BLACEA4D250 179 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 VSTM2BA6NLU5 285 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 BMP10O95393 424 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 CD63P08962 238 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 LIPCP11150 499 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 DRD2P14416 443 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 PCSK2P16519 638 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 TCN2P20062 427 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 JAK1P23458 1154 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 STAT5AP42229 794 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 C2orf80Q0P641 193 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 ERV3-1Q14264 604 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 HEPACAMQ14CZ8 416 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 NCF4Q15080 339 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 RPS6KA2Q15349 733 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 NKG7Q16617 165 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 VWA2Q5GFL6 755 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 FAM71E1Q6IPT2 247 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 CLNKQ7Z7G1 428 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 DTX1Q86Y01 620 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 STT3BQ8TCJ2 826 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 CT55Q8WUE5 264 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 NKD1Q969G9 470 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 MIEF2Q96C03 454 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 BRINP2Q9C0B6 783 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 RPF2Q9H7B2 306 aaKnown RBP14.31□□□□□ -0.12
ATG4D-211ENST00000589753 WDR54Q9H977 334 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 NXT1Q9UKK6 140 aaKnown RBP14.31□□□□□ -0.12
ATG4D-211ENST00000589753 ANGPTL2Q9UKU9 493 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 PCDHA9Q9Y5H5 950 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 GPR45Q9Y5Y3 372 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 SDK2Q58EX2 2172 aa14.31□□□□□ -0.12
ATG4D-211ENST00000589753 CLDN4O14493 209 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 AKAP10O43572 662 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 B4GALT2O60909 372 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 JRKO75564 520 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 PRKRAO75569 313 aaKnown RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 CDC123O75794 336 aaPredicted RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 LRATO95237 230 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 RAB40ALP0C0E4 278 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 ZGLP1P0C6A0 271 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 NCF2P19878 526 aaPredicted RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 DDCP20711 480 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 ALDH9A1P49189 494 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 CLDN8P56748 225 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 STX1BP61266 288 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 IRX1P78414 480 aaPredicted RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 MC1RQ01726 317 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 PDCD4Q53EL6 469 aaKnown RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 MFSD4BQ5TF39 518 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 GKAP1Q5VSY0 366 aaPredicted RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 MED25Q71SY5 747 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 ZNF595Q8IYB9 648 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 PRSS58Q8IYP2 241 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 MMP21Q8N119 569 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 IL22RA1Q8N6P7 574 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 ENDOVQ8N8Q3 282 aaKnown RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 TMEM52Q8NDY8 209 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 GFM2Q969S9 779 aaKnown RBP14.3□□□□□ -0.12
ATG4D-211ENST00000589753 DPY30Q9C005 99 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 LANCL2Q9NS86 450 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 HEY2Q9UBP5 337 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 CROTQ9UKG9 612 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 FER1L5A0AVI2 2057 aa14.3□□□□□ -0.12
ATG4D-211ENST00000589753 DCHS1Q96JQ0 3298 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 GLOD5A6NK44 160 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 C21orf140B9A014 251 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 ANKRD28O15084 1053 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 PRMT3O60678 531 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 CNOT3O75175 753 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 PRPS1L1P21108 318 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 DLSTP36957 453 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 HPCAL1P37235 193 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 RPL3P39023 403 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 ATP4BP51164 291 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 HNRNPFP52597 415 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 NME5P56597 212 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 HSD17B7P56937 341 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 PCBP4P57723 403 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 RPS15P62841 145 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 DNASE1L3Q13609 305 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 SQLEQ14534 574 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 MINDY4Q4G0A6 757 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 OR52E8Q6IFG1 317 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 SHISA6Q6ZSJ9 500 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 MIER2Q8N344 545 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms