RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SLC25A25Q6KCM7 469 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 GFRALQ6UXV0 394 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 RNF175Q8N4F7 328 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 FAM98AQ8NCA5 519 aaKnown RBP18.26■□□□□ 0.51
TPM4-208ENST00000588410 APCDD1LQ8NCL9 501 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 C7orf57Q8NEG2 295 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 THAP3Q8WTV1 239 aaPredicted RBP18.26■□□□□ 0.51
TPM4-208ENST00000588410 DAZLQ92904 295 aaKnown RBP18.26■□□□□ 0.51
TPM4-208ENST00000588410 NCLNQ969V3 563 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 MRPL57Q9BQC6 102 aaKnown RBP18.26■□□□□ 0.51
TPM4-208ENST00000588410 RNF11Q9Y3C5 154 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 SCN3AQ9NY46 2000 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 FLNCQ14315 2725 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 MYOCOSA0A1B0GUC4 107 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 STX16-NPEPL1H3BU86 382 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 STX16O14662 325 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 MLYCDO95822 493 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 SP1P08047 785 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 TLX1P31314 330 aaPredicted RBP18.25■□□□□ 0.51
TPM4-208ENST00000588410 CCNG1P51959 295 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 PMP22Q01453 160 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 SLAMF1Q13291 335 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 ZRSR2Q15696 482 aaKnown RBP18.25■□□□□ 0.51
TPM4-208ENST00000588410 C4orf17Q53FE4 359 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 L3MBTL4Q8NA19 623 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 TMEM125Q96AQ2 219 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 MTBPQ96DY7 904 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 SCMH1Q96GD3 660 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 SORBS1Q9BX66 1292 aaKnown RBP18.25■□□□□ 0.51
TPM4-208ENST00000588410 HES7Q9BYE0 225 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 MRPL46Q9H2W6 279 aaKnown RBP18.25■□□□□ 0.51
TPM4-208ENST00000588410 MS4A12Q9NXJ0 267 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 SEC14L3Q9UDX4 400 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 CLDN16Q9Y5I7 305 aa18.25■□□□□ 0.51
TPM4-208ENST00000588410 SHANK1Q9Y566 2161 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 LRRTM2O43300 516 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 RIPK2O43353 540 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 LDB3O75112 727 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 SLC25A12O75746 678 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 ZFAND5O76080 213 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 UNC5CO95185 931 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 LDLRP01130 860 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 TRHRP34981 398 aaPredicted RBP18.24■□□□□ 0.51
TPM4-208ENST00000588410 HLCSP50747 726 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 TDGF1P3P51864 188 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 ARFIP1P53367 373 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 PER3P56645 1201 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 KCNK10P57789 538 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 MAPKAPK3Q16644 382 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 TEX35Q5T0J7 233 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 TTC19Q6DKK2 380 aaPredicted RBP18.24■□□□□ 0.51
TPM4-208ENST00000588410 GALNTL5Q7Z4T8 443 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 TMEM156Q8N614 296 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 OR14A16Q8NHC5 309 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 VTI1BQ9UEU0 232 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 PLEKHB1Q9UF11 243 aaPredicted RBP18.24■□□□□ 0.51
TPM4-208ENST00000588410 PHF11Q9UIL8 331 aa18.24■□□□□ 0.51
TPM4-208ENST00000588410 PPIEQ9UNP9 301 aaKnown RBP18.24■□□□□ 0.51
TPM4-208ENST00000588410 DOCK10Q96BY6 2186 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 A0A1B0GUH1 482 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 A1L4Q6 167 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 PLPP1O14494 284 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 OR7A17O14581 309 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 NEURL1O76050 574 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 RNF224P0DH78 156 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 COX7A2P14406 83 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 MST1P26927 711 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 NEK2P51955 445 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 ALDH6A1Q02252 535 aaKnown RBP18.23■□□□□ 0.51
TPM4-208ENST00000588410 ID2Q02363 134 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 SRSF11Q05519 484 aaKnown RBP18.23■□□□□ 0.51
TPM4-208ENST00000588410 RBPJQ06330 500 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 ZNF468Q5VIY5 522 aaPredicted RBP18.23■□□□□ 0.51
TPM4-208ENST00000588410 ADGRD1Q6QNK2 874 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 GPR180Q86V85 440 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 ZCCHC7Q8N3Z6 543 aaKnown RBP18.23■□□□□ 0.51
TPM4-208ENST00000588410 MORN4Q8NDC4 146 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 CDK15Q96Q40 435 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 RPF2Q9H7B2 306 aaKnown RBP18.23■□□□□ 0.51
TPM4-208ENST00000588410 PCTPQ9UKL6 214 aa18.23■□□□□ 0.51
TPM4-208ENST00000588410 RP1L1Q8IWN7 2480 aaPredicted RBP18.23■□□□□ 0.51
TPM4-208ENST00000588410 LRRK2Q5S007 2527 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 IQANK1A0A1B0GTG1 560 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 C17orf105B2RV13 164 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 FOXE1O00358 373 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 DYRK3O43781 588 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 ITGA10O75578 1167 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 TAC1P20366 129 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 BUD31P41223 144 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 CUL3Q13618 768 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 CYP20A1Q6UW02 462 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 HSDL2Q6YN16 418 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 TIFABQ6ZNK6 161 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 MILR1Q7Z6M3 343 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 ARMC10Q8N2F6 343 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 OR52B6Q8NGF0 335 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 WDR20Q8TBZ3 569 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 PTPMT1Q8WUK0 201 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 MTFMTQ96DP5 389 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms