RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MAPKAP1Q9BPZ7 522 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 CCDC77Q9BR77 488 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 SORBS1Q9BX66 1292 aaKnown RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 MS4A8Q9BY19 250 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 ALOXE3Q9BYJ1 711 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 CHST11Q9NPF2 352 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 ERVK-11Q9UQG0 969 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 UTP11Q9Y3A2 253 aaKnown RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 A0A1B0GTH9 108 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 PINLYPA6NC86 204 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 WWP2O00308 870 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 PRRG2O14669 202 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
VMP1-206ENST00000587945 PDE9AO76083 593 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 OR6B1O95007 311 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 COX6B1P14854 86 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 TNNI3P19429 210 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 ATP5A1P25705 553 aaKnown RBP13.33□□□□□ -0.28
VMP1-206ENST00000587945 CASP2P42575 452 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 STX4Q12846 297 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 RCN2Q14257 317 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 TBCCQ15814 346 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 CMPK2Q5EBM0 449 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 IL20RBQ6UXL0 311 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 TBC1D1Q86TI0 1168 aaPredicted RBP13.33□□□□□ -0.28
VMP1-206ENST00000587945 ACOT4Q8N9L9 421 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 NXNL1Q96CM4 212 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
VMP1-206ENST00000587945 ATOH8Q96SQ7 321 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 OR8D2Q9GZM6 311 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 OR51B5Q9H339 312 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 LYRM4Q9HD34 91 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 TIMMDC1Q9NPL8 285 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 DEPPQ9NTK1 212 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 NUDT4Q9NZJ9 180 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 VTI1BQ9UEU0 232 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.28
VMP1-206ENST00000587945 HRH3Q9Y5N1 445 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 LRBAP50851 2863 aa13.33□□□□□ -0.28
VMP1-206ENST00000587945 A0A0G2JMM0 328 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 A0A1W2PPB8 328 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 A0A1W2PRS3 328 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 A8MVJ9 347 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 KIR3DP1A8MWS1 328 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 G3V3Y1 287 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 K7EPI3 171 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 KERAO60938 352 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 CLDN14O95500 239 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 LTA4HP09960 611 aaKnown RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 AGAP20933 346 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 HIST1H1TP22492 207 aaPredicted RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 CRABP2P29373 138 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 STX2P32856 288 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 PTGS2P35354 604 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 SOX3P41225 446 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 IRF9Q00978 393 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 MED27Q6P2C8 311 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 SYT10Q6XYQ8 523 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 HSDL2Q6YN16 418 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 CD163Q86VB7 1156 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 OR4N5Q8IXE1 308 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 LAS2Q8IYD9 372 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 ZFP62Q8NB50 900 aaPredicted RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 PSD4Q8NDX1 1056 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 OR52N2Q8NGI0 321 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 C16orf52Q8NHV5 167 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 ASB15Q8WXK1 588 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 DAZLQ92904 295 aaKnown RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 MTFMTQ96DP5 389 aaKnown RBP13.32□□□□□ -0.28
VMP1-206ENST00000587945 RASL10BQ96S79 203 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 DMRTA2Q96SC8 542 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 TBCDQ9BTW9 1192 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 DEFB127Q9H1M4 99 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 HPF1Q9NWY4 346 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 MYOTQ9UBF9 498 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 OPTCQ9UBM4 332 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 PPT2Q9UMR5 302 aa13.32□□□□□ -0.28
VMP1-206ENST00000587945 FBN2P35556 2912 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 LRRC14BA6NHZ5 514 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 C17orf105B2RV13 164 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 E9PLN8 166 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 ZNF354AO60765 605 aaPredicted RBP13.31□□□□□ -0.28
VMP1-206ENST00000587945 ETHE1O95571 254 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 TUBB4AP04350 444 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 TPOP07202 933 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 MTHFD2P13995 350 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 SSR2P43308 183 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 HK2P52789 917 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 SLC7A5Q01650 507 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 CAV1Q03135 178 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms