RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 UBXN8O00124 270 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 RTCAO00442 366 aaKnown RBP17.46■□□□□ 0.39
TRIM47-205ENST00000587774 PEX1O43933 1283 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 HS6ST1O60243 411 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 CTNSO60931 367 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 LDB3O75112 727 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 SUPT3HO75486 399 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 OR2J2O76002 312 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 ZFAND5O76080 213 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 IFNA16P05015 189 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 PTGER4P35408 488 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 SSR4P51571 173 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 TGM3Q08188 693 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 RCN2Q14257 317 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 TRADDQ15628 312 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 ZDHHC24Q6UX98 284 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 UBE3DQ7Z6J8 389 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 ISCA2Q86U28 154 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 TMEM132CQ8N3T6 1108 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 ZFP62Q8NB50 900 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-205ENST00000587774 STAG3L4Q8TBR4 150 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 FBF1Q8TES7 1133 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 ZNF473Q8WTR7 871 aaKnown RBP17.46■□□□□ 0.39
TRIM47-205ENST00000587774 UBTD2Q8WUN7 234 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 SREK1Q8WXA9 508 aaKnown RBP17.46■□□□□ 0.39
TRIM47-205ENST00000587774 ATOH8Q96SQ7 321 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 MAPKAP1Q9BPZ7 522 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 RAB17Q9H0T7 212 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 LYRM4Q9HD34 91 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 KCMF1Q9P0J7 381 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 YARS2Q9Y2Z4 477 aaKnown RBP17.46■□□□□ 0.39
TRIM47-205ENST00000587774 UTP11Q9Y3A2 253 aaKnown RBP17.46■□□□□ 0.39
TRIM47-205ENST00000587774 CLCA3PQ9Y6N3 262 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 C19orf84I3L1E1 186 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 PRRG2O14669 202 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 ADAM10O14672 748 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 CDC40O60508 579 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 KERAO60938 352 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 SH3BGRLO75368 114 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 CLDN14O95500 239 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 TUBB4AP04350 444 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 COX6B1P14854 86 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 ATP5A1P25705 553 aaKnown RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 STX2P32856 288 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 CASP2P42575 452 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 MAGEA4P43358 317 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 CAV1Q03135 178 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 STX4Q12846 297 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 BMPR2Q13873 1038 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 HIST2H2ACQ16777 129 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 CMPK2Q5EBM0 449 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 HIST2H2AA3Q6FI13 130 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 GDF7Q7Z4P5 450 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 TBC1D1Q86TI0 1168 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 LAS2Q8IYD9 372 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 C17orf53Q8N3J3 647 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 ZNF321PQ8N8H1 164 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 PSD4Q8NDX1 1056 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 OR14A16Q8NHC5 309 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 C16orf52Q8NHV5 167 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 PHF10Q8WUB8 498 aaKnown RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 PTPMT1Q8WUK0 201 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 DAZLQ92904 295 aaKnown RBP17.45■□□□□ 0.38
TRIM47-205ENST00000587774 DMRTA2Q96SC8 542 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 IGSF5Q9NSI5 407 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 DEPPQ9NTK1 212 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 MYOTQ9UBF9 498 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 VTI1BQ9UEU0 232 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 ERVK-11Q9UQG0 969 aa17.45■□□□□ 0.38
TRIM47-205ENST00000587774 CCDC168Q8NDH2 2452 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 A0A1B0GTH9 108 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 A8MVJ9 347 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 E9PLN8 166 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 K7EPI3 171 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 OR6B1O95007 311 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 LTA4HP09960 611 aaKnown RBP17.44■□□□□ 0.38
TRIM47-205ENST00000587774 PCNAP12004 261 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 HIST1H1TP22492 207 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-205ENST00000587774 SOX3P41225 446 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 ID2Q02363 134 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 MED27Q6P2C8 311 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 HSDL2Q6YN16 418 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 CD163Q86VB7 1156 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 RNF175Q8N4F7 328 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 ACOT4Q8N9L9 421 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 MORN4Q8NDC4 146 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 SRFBP1Q8NEF9 429 aaKnown RBP17.44■□□□□ 0.38
TRIM47-205ENST00000587774 ASB15Q8WXK1 588 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 MTFMTQ96DP5 389 aaKnown RBP17.44■□□□□ 0.38
TRIM47-205ENST00000587774 RASL10BQ96S79 203 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 VKORC1Q9BQB6 163 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 TBCDQ9BTW9 1192 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 ALOXE3Q9BYJ1 711 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 TRIM8Q9BZR9 551 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 OR8D2Q9GZM6 311 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 ROGDIQ9GZN7 287 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 NMRAL1Q9HBL8 299 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 PRM3Q9NNZ6 103 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 TIMMDC1Q9NPL8 285 aa17.44■□□□□ 0.38
TRIM47-205ENST00000587774 HPF1Q9NWY4 346 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms