RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 A0A1W2PR48 441 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 VSTM2BA6NLU5 285 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 PSMD12O00232 456 aaPredicted RBP16■□□□□ 0.15
PRKCSH-203ENST00000586486 AIFM1O95831 613 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 FHP07954 510 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 IL3P08700 152 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 CD63P08962 238 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 NR2F6P10588 404 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 DRD2P14416 443 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 TLX1P31314 330 aaPredicted RBP16■□□□□ 0.15
PRKCSH-203ENST00000586486 STAT5AP42229 794 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 C21orf58P58505 322 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 SF3A3Q12874 501 aaKnown RBP eCLIP16■□□□□ 0.151e-10■■■■□ 25.1
PRKCSH-203ENST00000586486 PTGR1Q14914 329 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 HEPACAMQ14CZ8 416 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 NCF4Q15080 339 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 NDUFAF5Q5TEU4 345 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 FAM71E1Q6IPT2 247 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 TMEM132CQ8N3T6 1108 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 ZNF764Q96H86 408 aaPredicted RBP16■□□□□ 0.15
PRKCSH-203ENST00000586486 EGLN2Q96KS0 407 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 TSSK3Q96PN8 268 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 CSF3RQ99062 836 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 RABEP2Q9H5N1 569 aa16■□□□□ 0.15
PRKCSH-203ENST00000586486 SDR39U1Q9NRG7 319 aaPredicted RBP16■□□□□ 0.15
PRKCSH-203ENST00000586486 NXT1Q9UKK6 140 aaKnown RBP16■□□□□ 0.15
PRKCSH-203ENST00000586486 MRPS33Q9Y291 106 aaKnown RBP16■□□□□ 0.15
PRKCSH-203ENST00000586486 C1orf226A1L170 272 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 ANKRD28O15084 1053 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 PRMT3O60678 531 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 BMP10O95393 424 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 RAB40ALP0C0E4 278 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 LIPCP11150 499 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 JAK1P23458 1154 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 ATP4BP51164 291 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 OCA2Q04671 838 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 PDCD4Q53EL6 469 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 FAM199XQ6PEV8 388 aaPredicted RBP15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 ZNF595Q8IYB9 648 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 SHISA5Q8N114 240 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 FAM47BQ8NA70 645 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 STT3BQ8TCJ2 826 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 ACTL8Q9H568 366 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 ZNF385DQ9H6B1 395 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 WDR41Q9HAD4 459 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 LANCL2Q9NS86 450 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 MRGBPQ9NV56 204 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 EHD3Q9NZN3 535 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 BAIAP2L1Q9UHR4 511 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 GPN3Q9UHW5 284 aaPredicted RBP15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 MAPRE3Q9UPY8 281 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 PCDHA9Q9Y5H5 950 aa15.99■□□□□ 0.15
PRKCSH-203ENST00000586486 AHCTF1Q8WYP5 2266 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 C21orf140B9A014 251 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 TERTO14746 1132 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CNOT3O75175 753 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CYC1P08574 325 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 DDCP20711 480 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 PRPS1L1P21108 318 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CLDN8P56748 225 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 NKG7Q16617 165 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 GKAP1Q5VSY0 366 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 C18orf63Q68DL7 685 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 OR52E8Q6IFG1 317 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 RIMKLAQ8IXN7 391 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CACNA2D3Q8IZS8 1091 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CLHC1Q8NHS4 586 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CT55Q8WUE5 264 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 STARD8Q92502 1023 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 NKD1Q969G9 470 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 MTERF3Q96E29 417 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 MARK4Q96L34 752 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 CATSPER2Q96P56 530 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 SPSB2Q99619 263 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 YIPF2Q9BWQ6 316 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 RPF2Q9H7B2 306 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 DKK4Q9UBT3 224 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 EXO1Q9UQ84 846 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 ARL2BPQ9Y2Y0 163 aa15.98■□□□□ 0.15
PRKCSH-203ENST00000586486 TBX19O60806 448 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 ZGLP1P0C6A0 271 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 HPCAL1P37235 193 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 RPL3P39023 403 aaKnown RBP15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 HSD17B7P56937 341 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 STX1BP61266 288 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 PDE7AQ13946 482 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 SQLEQ14534 574 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 VWA2Q5GFL6 755 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 TMEM52Q8NDY8 209 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 CDC26Q8NHZ8 85 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 MIEF2Q96C03 454 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 RBCK1Q9BYM8 510 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 REEP4Q9H6H4 257 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 TMEM45AQ9NWC5 275 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 ZIM2Q9NZV7 527 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 HEY2Q9UBP5 337 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 ANGPTL2Q9UKU9 493 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 MMACHCQ9Y4U1 282 aa15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 COPG1Q9Y678 874 aaKnown RBP15.97■□□□□ 0.15
PRKCSH-203ENST00000586486 AKAP13Q12802 2813 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms