RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 VMP1Q96GC9 406 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 ALOXE3Q9BYJ1 711 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 SEC14L3Q9UDX4 400 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 ADGRE2Q9UHX3 823 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 ZNF180Q9UJW8 692 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 FBXW2Q9UKT8 454 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 RNF11Q9Y3C5 154 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 PCDHGA11Q9Y5H2 935 aa20.01■□□□□ 0.79
PPP4R1-228ENST00000584074 NBPF19A0A087WUL8 3843 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 LDB3O75112 727 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 CLDN1O95832 211 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 RBP1P09455 135 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 TRHRP34981 398 aaPredicted RBP20■□□□□ 0.79
PPP4R1-228ENST00000584074 CYB561P49447 251 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 HLCSP50747 726 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 RPS13P62277 151 aaKnown RBP20■□□□□ 0.79
PPP4R1-228ENST00000584074 ID2Q02363 134 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 STX4Q12846 297 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 ELAVL1Q15717 326 aaKnown RBP20■□□□□ 0.79
PPP4R1-228ENST00000584074 CPSF6Q16630 551 aaKnown RBP eCLIP20■□□□□ 0.79
PPP4R1-228ENST00000584074 C1QL3Q5VWW1 255 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 OR4C11Q6IEV9 310 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 SLC25A25Q6KCM7 469 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 GALNTL5Q7Z4T8 443 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 TMEM178AQ8NBL3 297 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 RGMAQ96B86 450 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 SCYL1Q96KG9 808 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 XPR1Q9UBH6 696 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 TSC22D4Q9Y3Q8 395 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 CLCA3PQ9Y6N3 262 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 DOPEY1Q5JWR5 2465 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 POLEQ07864 2286 aa20■□□□□ 0.79
PPP4R1-228ENST00000584074 H0YIV9 168 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 PLPP1O14494 284 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 CDK2AP1O14519 115 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 FCHO1O14526 889 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 OR7A17O14581 309 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 PRKNO60260 465 aaPredicted RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 UGDHO60701 494 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 SLC25A12O75746 678 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 CNTFP26441 200 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 PIK3CGP48736 1102 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 RAP1GDS1P52306 607 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 SLAMF1Q13291 335 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 MAPKAPK3Q16644 382 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 METTL2BQ6P1Q9 378 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 IFT20Q8IY31 132 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 TMEM132CQ8N3T6 1108 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 L3MBTL4Q8NA19 623 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 PTPMT1Q8WUK0 201 aaPredicted RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 SREK1Q8WXA9 508 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 CDK15Q96Q40 435 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 NOL11Q9H8H0 719 aaKnown RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 TRIM45Q9H8W5 580 aaPredicted RBP19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 VTI1BQ9UEU0 232 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 SPACA6W5XKT8 324 aa19.99■□□□□ 0.79
PPP4R1-228ENST00000584074 SPTBN1Q01082 2364 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 EXOC1LA0A1B0GW35 172 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 ASPDHA6ND91 283 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 COL6A2P12110 1019 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 CPN2P22792 545 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 PTX3P26022 381 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 NEK2P51955 445 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 ZRSR2Q15696 482 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 TSNAXIP1Q2TAA8 658 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 C16orf47Q6ZP98 133 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 MAMDC2Q7Z304 686 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 FJX1Q86VR8 437 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 OR52B6Q8NGF0 335 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 ANKRD9Q96BM1 317 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 REPS1Q96D71 796 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 FRMD6Q96NE9 622 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 CCDC77Q9BR77 488 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 CENPKQ9BS16 269 aa19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 TSPAN10Q9H1Z9 355 aaPredicted RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 LIN28AQ9H9Z2 209 aaKnown RBP19.98■□□□□ 0.79
PPP4R1-228ENST00000584074 ICE1Q9Y2F5 2266 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 NME2P1O60361 137 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 SMIM24O75264 130 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 ITGA10O75578 1167 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 ZFAND5O76080 213 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 CLDN9O95484 217 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 ABHD2P08910 425 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 SNRPAP09012 282 aaKnown RBP19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 RHOXF2BP0C7M4 288 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 NME2P22392 152 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 GCAP28676 217 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 ARL1P40616 181 aaPredicted RBP19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 SERTAD2Q14140 314 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 OR4N5Q8IXE1 308 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 ZNF321PQ8N8H1 164 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 WDR20Q8TBZ3 569 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 DAZLQ92904 295 aaKnown RBP19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 ATP6V1E2Q96A05 226 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 TMEM125Q96AQ2 219 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 NSUN5Q96P11 429 aaKnown RBP19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 RHOXF2Q9BQY4 288 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 PCTPQ9UKL6 214 aa19.97■□□□□ 0.79
PPP4R1-228ENST00000584074 TMCO1Q9UM00 188 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms