RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 VSX2P58304 361 aaPredicted RBP10.78□□□□□ -0.68
NUP85-224ENST00000583948 HERVK_113P63132 956 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 YBX1P67809 324 aaKnown RBP10.78□□□□□ -0.68
NUP85-224ENST00000583948 GBX1Q14549 363 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 PCOLCEQ15113 449 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 TGFBIQ15582 683 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 ZSCAN26Q16670 478 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 UNC50Q53HI1 259 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 FBXO48Q5FWF7 155 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 ARL13AQ5H913 290 aaPredicted RBP10.78□□□□□ -0.68
NUP85-224ENST00000583948 ZNF678Q5SXM1 525 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 SBSNQ6UWP8 590 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 CYHR1Q6ZMK1 362 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 GALNTL5Q7Z4T8 443 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 OR6Y1Q8NGX8 325 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 CFAP61Q8NHU2 1237 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 SUN3Q8TAQ9 357 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 HM13Q8TCT9 377 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 THAP3Q8WTV1 239 aaPredicted RBP10.78□□□□□ -0.68
NUP85-224ENST00000583948 C10orf82Q8WW14 230 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 L3HYPDHQ96EM0 354 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 SORT1Q99523 831 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 VKORC1Q9BQB6 163 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 ERVK-6Q9BXR3 956 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 SYNPO2LQ9H987 977 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 PNPOQ9NVS9 261 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 COQ3Q9NZJ6 369 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 ARL2BPQ9Y2Y0 163 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 OARD1Q9Y530 152 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 HEBP2Q9Y5Z4 205 aa10.78□□□□□ -0.68
NUP85-224ENST00000583948 LOC105369274A0A096LPK9 316 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 LOC102723532A0A0G2JNH3 316 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 A0A1B0GTH9 108 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 IDSB3KWA1 339 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 INAFM1C9JVW0 142 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 EBAG9O00559 213 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 LIN7AO14910 233 aaPredicted RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 CTSVO60911 334 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 SEC24DO94855 1032 aaPredicted RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 TGDSO95455 350 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 ONECUT2O95948 504 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 C8GP07360 202 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 TSPAN8P19075 237 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 SERPINB5P36952 375 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 CD96P40200 585 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 AGTR2P50052 363 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 ARFIP2P53365 341 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 EMP2P54851 167 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 ALDH18A1P54886 795 aaKnown RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 TUBA3CQ13748 450 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 DSG2Q14126 1118 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 PHKG1Q16816 387 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 ZNF468Q5VIY5 522 aaPredicted RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 ABHD17BQ5VST6 288 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 TUBA3EQ6PEY2 450 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 FRMD7Q6ZUT3 714 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 CHSY3Q70JA7 882 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 WDR75Q8IWA0 830 aaKnown RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 OR4N4Q8N0Y3 316 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 CPSF7Q8N684 471 aaKnown RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 ZNF781Q8N8C0 355 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 LINC01555Q8NAE3 123 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 MDS2Q8NDY4 140 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 LILRB4Q8NHJ6 448 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 PHF10Q8WUB8 498 aaKnown RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 DLG3Q92796 817 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 NACC2Q96BF6 587 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 TMEM120AQ9BXJ8 343 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 TRIM54Q9BYV2 358 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 GSTO2Q9H4Y5 243 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 EML4Q9HC35 981 aaKnown RBP10.77□□□□□ -0.69
NUP85-224ENST00000583948 WWOXQ9NZC7 414 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 FIS1Q9Y3D6 152 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 RAP2CQ9Y3L5 183 aa10.77□□□□□ -0.69
NUP85-224ENST00000583948 SLC5A10A0PJK1 596 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 STX16-NPEPL1H3BU86 382 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 STX16O14662 325 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
NUP85-224ENST00000583948 KLK8O60259 260 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 GPC4O75487 556 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 PDE9AO76083 593 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 EIF2S1P05198 315 aaKnown RBP10.76□□□□□ -0.69
NUP85-224ENST00000583948 HEXAP06865 529 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 GSTM1P09488 218 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 DNASE1P24855 282 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 BDKRB1P46663 353 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 RAB28P51157 221 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 AQP5P55064 265 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 CDH13P55290 713 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 GSTM4Q03013 218 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 SP140Q13342 867 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 SETDB1Q15047 1291 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 PPP1R3AQ16821 1122 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 C18orf21Q32NC0 220 aaPredicted RBP10.76□□□□□ -0.69
NUP85-224ENST00000583948 SH2D4BQ5SQS7 431 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 WASHC2DQ5SRD0 308 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 MBOAT1Q6ZNC8 495 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 LANCL3Q6ZV70 420 aa10.76□□□□□ -0.69
NUP85-224ENST00000583948 CDC20BQ86Y33 519 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms