RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 FAM129CQ86XR2 697 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 MFSD4AQ8N468 514 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 ANKRD53Q8N9V6 530 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 S100ZQ8WXG8 99 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 UBE2FQ969M7 185 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 APOL4Q9BPW4 351 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 GABARAPL1Q9H0R8 117 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 TRANK1O15050 2925 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 PDZK1P1A8MUH7 402 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 TNFRSF11BO00300 401 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 KMOO15229 486 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 GCM2O75603 506 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 KLHL18O94889 574 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 BMP4P12644 408 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 CCR8P51685 355 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 MVDP53602 400 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SELENOWP63302 87 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SGCGQ13326 291 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 MAPK11Q15759 364 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SPDYE7PQ495Y7 208 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 KHDRBS2Q5VWX1 349 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 METRNLQ641Q3 311 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 TNFAIP8L2Q6P589 184 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SLC22A16Q86VW1 577 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 OXR1Q8N573 874 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 C7orf34Q96L11 122 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 KCNC2Q96PR1 638 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SLC6A17Q9H1V8 727 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 FZD3Q9NPG1 666 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 REV3LO60673 3130 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 LINC01565O15544 149 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 ALDH4A1P30038 563 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 MANFP55145 182 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 LSM3P62310 102 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 IL18R1Q13478 541 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 PDE7AQ13946 482 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 Q6ZPB1 254 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 SMPDL3AQ92484 453 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
SRSF1-205ENST00000582730 NLNQ9BYT8 704 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 ERVK-18Q9QC07 812 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 PLEKHM1Q9Y4G2 1056 aa13.04□□□□□ -0.32
SRSF1-205ENST00000582730 FAM20BO75063 409 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 NDUFS2O75306 463 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 TNFRSF21O75509 655 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-205ENST00000582730 RYKP34925 604 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 GABARAPL2P60520 117 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 FCHO2Q0JRZ9 810 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 ZNF540Q8NDQ6 660 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 NDNFQ8TB73 568 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-205ENST00000582730 SCN3BQ9NY72 215 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 PCDHGB3Q9Y5G1 929 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 KRT75O95678 551 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 TCEA1P23193 301 aaKnown RBP13.03□□□□□ -0.32
SRSF1-205ENST00000582730 CXCR2P25025 360 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 DGCR6Q14129 220 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
SRSF1-205ENST00000582730 KIAA1614Q5VZ46 1190 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 RAB42Q8N4Z0 105 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 KIAA1958Q8N8K9 716 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 CXorf36Q9H7Y0 433 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 FBXL12Q9NXK8 326 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
SRSF1-205ENST00000582730 OR52A4PA6NMU1 304 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 FAM47E-STBD1D6RA91 191 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 J3KTA2 159 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 M0R3G1 203 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 POU2F1P14859 743 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 ITIH1P19827 911 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 MAP2K4P45985 399 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 RPP38P78345 283 aaKnown RBP13.02□□□□□ -0.32
SRSF1-205ENST00000582730 NPRL3Q12980 569 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 CARTPTQ16568 116 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 ADPRMQ3LIE5 342 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 GOT1L1Q8NHS2 421 aaPredicted RBP13.02□□□□□ -0.32
SRSF1-205ENST00000582730 FGF14Q92915 247 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 MYADMQ96S97 322 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 INSM2Q96T92 566 aaPredicted RBP13.02□□□□□ -0.32
SRSF1-205ENST00000582730 MACROD1Q9BQ69 325 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 MS4A8Q9BY19 250 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 ALOXE3Q9BYJ1 711 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 OBP2AQ9NY56 170 aa13.02□□□□□ -0.32
SRSF1-205ENST00000582730 KLHL3Q9UH77 587 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms