RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	C17orf105	B2RV13	164 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ZNF354A	O60765	605 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	STK16	O75716	305 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	FAM155B	O75949	473 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	S100B	P04271	92 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PCNA	P12004	261 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CD1D	P15813	335 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PAFAH1B1	P43034	410 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	MSH2	P43246	934 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	HK2	P52789	917 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	IRF8	Q02556	426 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PMPCA	Q10713	525 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CHIT1	Q13231	466 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PDK4	Q16654	411 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ADPRM	Q3LIE5	342 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SULT1C3	Q6IMI6	304 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ARHGAP11A	Q6P4F7	1023 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	UBE3D	Q7Z6J8	389 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	OR4N5	Q8IXE1	308 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TCAIM	Q8N3R3	496 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	RNF175	Q8N4F7	328 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	OR5M3	Q8NGP4	307 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SLC2A12	Q8TD20	617 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	RND1	Q92730	232 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SCYL1	Q96KG9	808 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	NAPG	Q99747	312 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SPOCK3	Q9BQ16	436 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SORBS1	Q9BX66	1292 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CAPS2	Q9BXY5	557 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TTTY12	Q9BZ98	90 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ENKD1	Q9H0I2	346 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TP63	Q9H3D4	680 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CNOT10	Q9H9A5	744 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PRDM7	Q9NQW5	492 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PNPLA3	Q9NST1	481 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	RNF6	Q9Y252	685 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SAR1B	Q9Y6B6	198 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	EML6	Q6ZMW3	1958 aa		10.79	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ZNF407	Q9C0G0	2248 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CCDC188	H7C350	402 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ACOT7	O00154	380 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CTNS	O60931	367 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ETHE1	O95571	254 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TGFB1	P01137	390 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	STMN1	P16949	149 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	EPOR	P19235	508 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ATP5A1	P25705	553 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	GSTM2	P28161	218 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	HPD	P32754	393 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	GGT5	P36269	586 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	MAGEA5	P43359	124 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	KCNC1	P48547	511 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	DNASE1L1	P49184	302 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	NUP107	P57740	925 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TGM3	Q08188	693 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	EFTUD2	Q15029	972 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	EMC4	Q5J8M3	183 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	HIST2H2AA3	Q6FI13	130 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TMEM211	Q6ICI0	200 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ZNF585A	Q6P3V2	769 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CDH24	Q86UP0	819 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CTAGE3P	Q8IX95	158 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PDPR	Q8NCN5	879 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	OR14A16	Q8NHC5	309 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CDKL2	Q92772	493 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	DAZL	Q92904	295 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	C14orf79	Q96F83	325 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	TSPAN17	Q96FV3	270 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	SEC16B	Q96JE7	1060 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	KCNC2	Q96PR1	638 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	GPR22	Q99680	433 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	RBBP8	Q99708	897 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	EFCAB11	Q9BUY7	163 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	EHD1	Q9H4M9	534 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	ALG9	Q9H6U8	611 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PLSCR2	Q9NRY7	297 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	VTI1B	Q9UEU0	232 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	PTBP2	Q9UKA9	531 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	F8	P00451	2351 aa		10.78	□□□□□ -0.68
CDK5RAP3-223	ENST00000582114	CCDC168	Q8NDH2	2452 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ATP6AP2	A0A1C7CYW4	349 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	TCRBV9S1A1T	A0A576	114 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SUPT3H	B4E1H0	165 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	UBXN8	O00124	270 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FANCG	O15287	622 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	FGF17	O60258	216 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SUPT3H	O75486	399 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	PRKRA	O75569	313 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ATP6AP2	O75787	350 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CELA3A	P09093	270 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CCL3	P10147	92 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CPN2	P22792	545 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	CHRNB4	P30926	498 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	SSR2	P43308	183 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	ATP6V0D1	P61421	351 aa		10.77	□□□□□ -0.69
CDK5RAP3-223	ENST00000582114	RNF4	P78317	190 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms