RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 UGT2B7P16662 529 aa8.83□□□□□ -1
SS18-220ENST00000582092 GPX2P18283 190 aa8.83□□□□□ -1
SS18-220ENST00000582092 UQCRC2P22695 453 aa8.83□□□□□ -1
SS18-220ENST00000582092 TPP2P29144 1249 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 CTSKP43235 329 aa8.83□□□□□ -1
SS18-220ENST00000582092 GRK6P43250 576 aa8.83□□□□□ -1
SS18-220ENST00000582092 TSFMP43897 325 aaKnown RBP8.83□□□□□ -1
SS18-220ENST00000582092 RXRGP48443 463 aa8.83□□□□□ -1
SS18-220ENST00000582092 WNT3P56703 355 aa8.83□□□□□ -1
SS18-220ENST00000582092 YBX1P67809 324 aaKnown RBP8.83□□□□□ -1
SS18-220ENST00000582092 BTN3A2P78410 334 aa8.83□□□□□ -1
SS18-220ENST00000582092 SIM1P81133 766 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 VAC14Q08AM6 782 aa8.83□□□□□ -1
SS18-220ENST00000582092 SPIDRQ14159 915 aa8.83□□□□□ -1
SS18-220ENST00000582092 SLC5A12Q1EHB4 618 aa8.83□□□□□ -1
SS18-220ENST00000582092 LRRC23Q53EV4 343 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 TMTC4Q5T4D3 741 aa8.83□□□□□ -1
SS18-220ENST00000582092 CPZQ66K79 652 aa8.83□□□□□ -1
SS18-220ENST00000582092 TMEM26Q6ZUK4 368 aa8.83□□□□□ -1
SS18-220ENST00000582092 ABHD13Q7L211 337 aa8.83□□□□□ -1
SS18-220ENST00000582092 PIP4P1Q86T03 277 aa8.83□□□□□ -1
SS18-220ENST00000582092 PAQR7Q86WK9 346 aa8.83□□□□□ -1
SS18-220ENST00000582092 SLC30A8Q8IWU4 369 aa8.83□□□□□ -1
SS18-220ENST00000582092 FAM20CQ8IXL6 584 aa8.83□□□□□ -1
SS18-220ENST00000582092 ADGRG5Q8IZF4 528 aa8.83□□□□□ -1
SS18-220ENST00000582092 SLC22A18ASQ8N1D0 253 aa8.83□□□□□ -1
SS18-220ENST00000582092 SDR16C5Q8N3Y7 309 aa8.83□□□□□ -1
SS18-220ENST00000582092 DTWD1Q8N5C7 304 aa8.83□□□□□ -1
SS18-220ENST00000582092 FAM47BQ8NA70 645 aa8.83□□□□□ -1
SS18-220ENST00000582092 C11orf65Q8NCR3 313 aa8.83□□□□□ -1
SS18-220ENST00000582092 ZNF548Q8NEK5 533 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 OR2I1PQ8NGU4 316 aa8.83□□□□□ -1
SS18-220ENST00000582092 PNPT1Q8TCS8 783 aaKnown RBP8.83□□□□□ -1
SS18-220ENST00000582092 SLC37A2Q8TED4 501 aa8.83□□□□□ -1
SS18-220ENST00000582092 CREB3L4Q8TEY5 395 aa8.83□□□□□ -1
SS18-220ENST00000582092 LZICQ8WZA0 190 aa8.83□□□□□ -1
SS18-220ENST00000582092 N4BP2L2Q92802 583 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 EXOSC8Q96B26 276 aaKnown RBP8.83□□□□□ -1
SS18-220ENST00000582092 TM4SF18Q96CE8 201 aa8.83□□□□□ -1
SS18-220ENST00000582092 SLC47A1Q96FL8 570 aa8.83□□□□□ -1
SS18-220ENST00000582092 BTBD9Q96Q07 612 aa8.83□□□□□ -1
SS18-220ENST00000582092 ELF4Q99607 663 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 SLC38A3Q99624 504 aa8.83□□□□□ -1
SS18-220ENST00000582092 CHID1Q9BWS9 393 aa8.83□□□□□ -1
SS18-220ENST00000582092 SLC6A16Q9GZN6 736 aa8.83□□□□□ -1
SS18-220ENST00000582092 ERVMER34-1Q9H9K5 563 aa8.83□□□□□ -1
SS18-220ENST00000582092 ADPRHL2Q9NX46 363 aa8.83□□□□□ -1
SS18-220ENST00000582092 RIMS3Q9UJD0 308 aa8.83□□□□□ -1
SS18-220ENST00000582092 FBXW2Q9UKT8 454 aa8.83□□□□□ -1
SS18-220ENST00000582092 CNOT11Q9UKZ1 510 aaKnown RBP8.83□□□□□ -1
SS18-220ENST00000582092 RAB26Q9ULW5 256 aa8.83□□□□□ -1
SS18-220ENST00000582092 KLHL20Q9Y2M5 609 aa8.83□□□□□ -1
SS18-220ENST00000582092 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
SS18-220ENST00000582092 ZNF780BQ9Y6R6 833 aa8.83□□□□□ -1
SS18-220ENST00000582092 TRBV5-3A0A0A0MS03 114 aa8.82□□□□□ -1
SS18-220ENST00000582092 A0A0J9YVX5 310 aa8.82□□□□□ -1
SS18-220ENST00000582092 C1orf226A1L170 272 aa8.82□□□□□ -1
SS18-220ENST00000582092 MAGEA13PA6NCF6 341 aa8.82□□□□□ -1
SS18-220ENST00000582092 A6NCN8 305 aa8.82□□□□□ -1
SS18-220ENST00000582092 SAC3D1A6NKF1 404 aa8.82□□□□□ -1
SS18-220ENST00000582092 RHPN2P1A8MT19 583 aa8.82□□□□□ -1
SS18-220ENST00000582092 H0YJX3 145 aa8.82□□□□□ -1
SS18-220ENST00000582092 CLOCKO15516 846 aa8.82□□□□□ -1
SS18-220ENST00000582092 B3GALT2O43825 422 aa8.82□□□□□ -1
SS18-220ENST00000582092 TBX19O60806 448 aa8.82□□□□□ -1
SS18-220ENST00000582092 E2F6O75461 281 aa8.82□□□□□ -1
SS18-220ENST00000582092 SERPINA1P01009 418 aa8.82□□□□□ -1
SS18-220ENST00000582092 CST1P01037 141 aa8.82□□□□□ -1
SS18-220ENST00000582092 STATHP02808 62 aa8.82□□□□□ -1
SS18-220ENST00000582092 CSF2P04141 144 aa8.82□□□□□ -1
SS18-220ENST00000582092 BMP2P12643 396 aa8.82□□□□□ -1
SS18-220ENST00000582092 ZNF23P17027 643 aa8.82□□□□□ -1
SS18-220ENST00000582092 CDH3P22223 829 aa8.82□□□□□ -1
SS18-220ENST00000582092 BUD31P41223 144 aaPredicted RBP8.82□□□□□ -1
SS18-220ENST00000582092 SKP1P63208 163 aa8.82□□□□□ -1
SS18-220ENST00000582092 SHC2P98077 582 aa8.82□□□□□ -1
SS18-220ENST00000582092 FOLH1Q04609 750 aa8.82□□□□□ -1
SS18-220ENST00000582092 FOXC1Q12948 553 aa8.82□□□□□ -1
SS18-220ENST00000582092 FADDQ13158 208 aa8.82□□□□□ -1
SS18-220ENST00000582092 PDE7AQ13946 482 aa8.82□□□□□ -1
SS18-220ENST00000582092 RGNQ15493 299 aa8.82□□□□□ -1
SS18-220ENST00000582092 ATP6AP1Q15904 470 aa8.82□□□□□ -1
SS18-220ENST00000582092 ZIC1Q15915 447 aa8.82□□□□□ -1
SS18-220ENST00000582092 VMACQ2NL98 169 aa8.82□□□□□ -1
SS18-220ENST00000582092 SFT2D3Q587I9 215 aa8.82□□□□□ -1
SS18-220ENST00000582092 ZC3H12BQ5HYM0 836 aaKnown RBP8.82□□□□□ -1
SS18-220ENST00000582092 GCNT6Q5T4J0 391 aa8.82□□□□□ -1
SS18-220ENST00000582092 ZNF425Q6IV72 752 aa8.82□□□□□ -1
SS18-220ENST00000582092 IRGCQ6NXR0 463 aa8.82□□□□□ -1
SS18-220ENST00000582092 BHLHB9Q6PI77 547 aa8.82□□□□□ -1
SS18-220ENST00000582092 SPESP1Q6UW49 350 aa8.82□□□□□ -1
SS18-220ENST00000582092 SZRD1Q7Z422 152 aa8.82□□□□□ -1
SS18-220ENST00000582092 CALHM3Q86XJ0 350 aa8.82□□□□□ -1
SS18-220ENST00000582092 ZC3H7AQ8IWR0 971 aaKnown RBP8.82□□□□□ -1
SS18-220ENST00000582092 MSRB3Q8IXL7 192 aa8.82□□□□□ -1
SS18-220ENST00000582092 SAMD14Q8IZD0 417 aaPredicted RBP8.82□□□□□ -1
SS18-220ENST00000582092 PACRGLQ8N7B6 248 aa8.82□□□□□ -1
SS18-220ENST00000582092 ANKFN1Q8N957 763 aa8.82□□□□□ -1
SS18-220ENST00000582092 GAL3ST3Q96A11 431 aa8.82□□□□□ -1
SS18-220ENST00000582092 CIDECQ96AQ7 238 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms