RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 LIM2P55344 173 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 DSTNP60981 165 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.32
RNF43-205ENST00000581868 ZMAT1Q5H9K5 638 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 NXNL2Q5VZ03 156 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 GATAD2AQ86YP4 633 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 CD99L2Q8TCZ2 262 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 GPR151Q8TDV0 419 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 GLYATL1Q969I3 302 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 TRNT1Q96Q11 434 aaKnown RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 RC3H2Q9HBD1 1191 aaKnown RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 SMURF1Q9HCE7 757 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 HHATLQ9HCP6 504 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 MIEF1Q9NQG6 463 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 CRNNQ9UBG3 495 aaPredicted RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 WBP11Q9Y2W2 641 aaKnown RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 A8MVJ9 347 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 H3BQ06 376 aaPredicted RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 SH3BP5O60239 455 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 SNX4O95219 450 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 C1orf105O95561 183 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 C1GALT1C1LP0DN25 315 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 WEE1P30291 646 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 ETV6P41212 452 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 HIST2H2AA3Q6FI13 130 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 FAM71E1Q6IPT2 247 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 TMC5Q6UXY8 1006 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 CEACAM20Q6UY09 585 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 WDR53Q7Z5U6 358 aaPredicted RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 ZNF366Q8N895 744 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 AP2M1Q96CW1 435 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 RERGLQ9H628 205 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 MOV10Q9HCE1 1003 aaKnown RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 DDX28Q9NUL7 540 aaKnown RBP13.07□□□□□ -0.32
RNF43-205ENST00000581868 MUTYHQ9UIF7 546 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 ITM2BQ9Y287 266 aa13.07□□□□□ -0.32
RNF43-205ENST00000581868 MN1Q10571 1320 aaPredicted RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 PCM1Q15154 2024 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 A8MV72 311 aaPredicted RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 C5orf58C9J3I9 102 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 OR10H3O60404 316 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 MPZL2O60487 215 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 SLITRK5O94991 958 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 MFN2O95140 757 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 KRT75O95678 551 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 BCHEP06276 602 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 CD72P21854 359 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 PRLHRP49683 370 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 PCBP3P57721 371 aaKnown RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 MXD1Q05195 221 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 ELOAQ14241 798 aaKnown RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 C19orf48Q6RUI8 117 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 SLC39A11Q8N1S5 342 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 TAPBPLQ9BX59 468 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 BARHL1Q9BZE3 327 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 CXorf36Q9H7Y0 433 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 DYRK4Q9NR20 520 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 ENOPH1Q9UHY7 261 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 ANKDD1BA6NHY2 528 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 QSOX1O00391 747 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 LRG1P02750 347 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 CHRM5P08912 532 aaPredicted RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 S100A1P23297 94 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 TIE1P35590 1138 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 DCDC1P59894 354 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 PDE7AQ13946 482 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 SEC23BQ15437 767 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 ZNF770Q6IQ21 691 aaPredicted RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 REEP3Q6NUK4 255 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 CELF5Q8N6W0 485 aaKnown RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 ST13P5Q8NFI4 369 aaPredicted RBP13.06□□□□□ -0.32
RNF43-205ENST00000581868 RAB8BQ92930 207 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 OR2A14Q96R47 310 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 NLNQ9BYT8 704 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 UCK2Q9BZX2 261 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 ZNF221Q9UK13 617 aa13.06□□□□□ -0.32
RNF43-205ENST00000581868 CSO75390 466 aaKnown RBP13.05□□□□□ -0.32
RNF43-205ENST00000581868 SCG5P05408 212 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 DAB2P98082 770 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 PCDH1Q08174 1060 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 GRIN2CQ14957 1233 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 TAB1Q15750 504 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 ARMC4Q5T2S8 1044 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 PAQR6Q6TCH4 344 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 DEF8Q6ZN54 512 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 TMC8Q8IU68 726 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 RBM45Q8IUH3 476 aaKnown RBP13.05□□□□□ -0.32
RNF43-205ENST00000581868 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 TRMT61AQ96FX7 289 aaKnown RBP13.05□□□□□ -0.32
RNF43-205ENST00000581868 EFCAB11Q9BUY7 163 aa13.05□□□□□ -0.32
RNF43-205ENST00000581868 CCDC32Q9BV29 185 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms