RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MAPRE3Q9UPY8 281 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 TMED5Q9Y3A6 229 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 TSC22D4Q9Y3Q8 395 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 TIMM22Q9Y584 194 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 ATP6AP2A0A1C7CYW4 349 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 MEN1O00255 615 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 MANBAO00462 879 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 AIM2O14862 343 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 ATP6AP2O75787 350 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 RSL1D1O76021 490 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 PRR35P0CG20 571 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 PCNAP12004 261 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 ALAS2P22557 587 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 STAT5AP42229 794 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 FOXA1P55317 472 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 EMX2Q04743 252 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 TGM3Q08188 693 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 TBL3Q12788 808 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 CSTF3Q12996 717 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 CPSF6Q16630 551 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 PRAMEF17Q5VTA0 474 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 C1orf146Q5VVC0 180 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 FBXW10Q5XX13 1052 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 TMEM198Q66K66 360 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 TMEM214Q6NUQ4 689 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 TTLL10Q6ZVT0 673 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 ULK2Q8IYT8 1036 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 DSELQ8IZU8 1212 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 FAM13CQ8NE31 585 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 OR7G3Q8NG95 312 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 SELENOMQ8WWX9 145 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 STARD8Q92502 1023 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 MR1Q95460 341 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 METTL2AQ96IZ6 378 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 C10orf90Q96M02 699 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 GBP5Q96PP8 586 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 CENPKQ9BS16 269 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 BRINP2Q9C0B6 783 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 SLC6A16Q9GZN6 736 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 SYNPO2LQ9H987 977 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 TNFRSF12AQ9NP84 129 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 SDR39U1Q9NRG7 319 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 AIG1Q9NVV5 245 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 ASIC5Q9NY37 505 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 DHCR7Q9UBM7 475 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 RNF11Q9Y3C5 154 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 SLC22A7Q9Y694 548 aa12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 UTP20O75691 2785 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-220ENST00000581737 FER1L5A0AVI2 2057 aa12.77□□□□□ -0.36
CSNK1D-220ENST00000581737 A0A088AWK7 358 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 C15orf38-AP3S2A0A0A6YYH1 394 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 SERTM1A2A2V5 107 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 C21orf140B9A014 251 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 MRASO14807 208 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 PEX11AO75192 247 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 MYO1DO94832 1006 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ITGB2P05107 769 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 CD63P08962 238 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ACPPP15309 386 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 AVPR1BP47901 424 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 DCDP81605 110 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 TLE1Q04724 770 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 SPATS1Q496A3 300 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 TMEM35AQ53FP2 167 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 C1orf189Q5VU69 101 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 FRG2Q64ET8 278 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 TIPARPQ7Z3E1 657 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 TRIM46Q7Z4K8 759 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ARPINQ7Z6K5 226 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 DEFB107AQ8IZN7 70 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC38A9Q8NBW4 561 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 GLB1L3Q8NCI6 653 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ZCCHC10Q8TBK6 192 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 NKD1Q969G9 470 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 GAL3ST3Q96A11 431 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 FKBP10Q96AY3 582 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 RCN3Q96D15 328 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 MARK4Q96L34 752 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 FRG2BQ96QU4 278 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ARHGAP9Q9BRR9 750 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 TUBB1Q9H4B7 451 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 DCLRE1BQ9H816 532 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 WDR41Q9HAD4 459 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ANKHQ9HCJ1 492 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 LHX9Q9NQ69 397 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 CCDC167Q9P0B6 97 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 GPN3Q9UHW5 284 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF490Q9ULM2 529 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 PPT2Q9UMR5 302 aa12.77□□□□□ -0.37
CSNK1D-220ENST00000581737 TLN1Q9Y490 2541 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 H0YIG0 161 aa12.76□□□□□ -0.37
CSNK1D-220ENST00000581737 FOXE1O00358 373 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms