RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SORBS1Q9BX66 1292 aaKnown RBP18.22■□□□□ 0.51
SREBF1-220ENST00000581707 ADAP2Q9NPF8 381 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 PCTPQ9UKL6 214 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 BLACEA4D250 179 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 CDK2AP1O14519 115 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 IFNA16P05015 189 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 CLCN2P51788 898 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 MLF1P58340 268 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 STX4Q12846 297 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 SLAMF1Q13291 335 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 OR1C1Q15619 314 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 ZRSR2Q15696 482 aaKnown RBP18.21■□□□□ 0.51
SREBF1-220ENST00000581707 ZNF324BQ6AW86 544 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-220ENST00000581707 SPINK14Q6IE38 97 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 HORMAD2Q8N7B1 307 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 APCDD1LQ8NCL9 501 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 MDS2Q8NDY4 140 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 OR52B6Q8NGF0 335 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 NSUN5Q96P11 429 aaKnown RBP18.21■□□□□ 0.51
SREBF1-220ENST00000581707 CDK15Q96Q40 435 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 SLX1AQ9BQ83 275 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 NTMT1Q9BV86 223 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 ALOXE3Q9BYJ1 711 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 PSD3Q9NYI0 1048 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 FETUBQ9UGM5 382 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 FBXW2Q9UKT8 454 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 PPIEQ9UNP9 301 aaKnown RBP18.21■□□□□ 0.51
SREBF1-220ENST00000581707 PCDHGB6Q9Y5F9 930 aa18.21■□□□□ 0.51
SREBF1-220ENST00000581707 TRBV11-1A0A0K0K1C0 115 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 IQANK1A0A1B0GTG1 560 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 MYOCOSA0A1B0GUC4 107 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 FOXE1O00358 373 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-220ENST00000581707 PLPP1O14494 284 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 CRYABP02511 175 aaKnown RBP18.2■□□□□ 0.5
SREBF1-220ENST00000581707 CD46P15529 392 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 CPN2P22792 545 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 TPP2P29144 1249 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-220ENST00000581707 NEK2P51955 445 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 ARFIP1P53367 373 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 ELAVL1Q15717 326 aaKnown RBP18.2■□□□□ 0.5
SREBF1-220ENST00000581707 GSPT2Q8IYD1 628 aaKnown RBP18.2■□□□□ 0.5
SREBF1-220ENST00000581707 TMEM132CQ8N3T6 1108 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 TMEM151AQ8N4L1 468 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 EIF1ADQ8N9N8 165 aaKnown RBP18.2■□□□□ 0.5
SREBF1-220ENST00000581707 DNAJB8Q8NHS0 232 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 WDR20Q8TBZ3 569 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 SSC4DQ8WTU2 575 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 NR4A3Q92570 626 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 NCLNQ969V3 563 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 VMP1Q96GC9 406 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 PSMG3-AS1Q96PY0 264 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 EPB41L4BQ9H329 900 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 L2HGDHQ9H9P8 463 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 ZBTB26Q9HCK0 441 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 KLHL1Q9NR64 748 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 VTI1BQ9UEU0 232 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 CLCA3PQ9Y6N3 262 aa18.2■□□□□ 0.5
SREBF1-220ENST00000581707 LDB3O75112 727 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 SBK3P0C264 359 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 GPR143P51810 404 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 CUL3Q13618 768 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 SERTAD2Q14140 314 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 TEX35Q5T0J7 233 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 GPR180Q86V85 440 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 LCA5Q86VQ0 697 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 ARMC10Q8N2F6 343 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 ZCCHC7Q8N3Z6 543 aaKnown RBP18.19■□□□□ 0.5
SREBF1-220ENST00000581707 THAP3Q8WTV1 239 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-220ENST00000581707 DAZLQ92904 295 aaKnown RBP18.19■□□□□ 0.5
SREBF1-220ENST00000581707 MTFMTQ96DP5 389 aaKnown RBP18.19■□□□□ 0.5
SREBF1-220ENST00000581707 C5orf34Q96MH7 638 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 CCDC77Q9BR77 488 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 SEMA4BQ9NPR2 832 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-220ENST00000581707 MS4A12Q9NXJ0 267 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 LRFN1Q9P244 771 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 PSMC3IPQ9P2W1 217 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-220ENST00000581707 ICE1Q9Y2F5 2266 aa18.19■□□□□ 0.5
SREBF1-220ENST00000581707 A8MT66 165 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 FCHO1O14526 889 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 NEURL1O76050 574 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 RPS17P08708 135 aaKnown RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 TNNI3P19429 210 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 CYB561P49447 251 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 TDGF1P3P51864 188 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 ID2Q02363 134 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 TRAF3Q13114 568 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 ZNF468Q5VIY5 522 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 TTC19Q6DKK2 380 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 RPS27LQ71UM5 84 aaKnown RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 MILR1Q7Z6M3 343 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 TMEM178AQ8NBL3 297 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 C7orf57Q8NEG2 295 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 PTPMT1Q8WUK0 201 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 ANKRD9Q96BM1 317 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 SCMH1Q96GD3 660 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 ZNF717Q9BY31 904 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 HES7Q9BYE0 225 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 RPF2Q9H7B2 306 aaKnown RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 TMEM216Q9P0N5 145 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms