RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SLC12A4Q9UP95 1085 aa14.66□□□□□ -0.06
SS18-216ENST00000580751 LAMA5O15230 3695 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 A0A0G2JN53 185 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 VSTM2BA6NLU5 285 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 CCT8L1PA6NM43 557 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 ZNF891A8MT65 544 aaPredicted RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 SAP18O00422 153 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 PLPP1O14494 284 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 CREG1O75629 220 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 KLF7O75840 302 aaPredicted RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 RECKO95980 971 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 B3GALT4O96024 378 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 ZGLP1P0C6A0 271 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 HIST1H1TP22492 207 aaPredicted RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 CERS1P27544 350 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 XCR1P46094 333 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 SRSF6Q13247 344 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 KRT72Q14CN4 511 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 NR6A1Q15406 480 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 SYT16Q17RD7 645 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 CRTC2Q53ET0 693 aaPredicted RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 SPIN4Q56A73 249 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 OR4C11Q6IEV9 310 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 YTHDF3Q7Z739 585 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 CLNKQ7Z7G1 428 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 ZCCHC7Q8N3Z6 543 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 OR5T3Q8NGG3 340 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 OR51Q1Q8NH59 317 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 SPSB2Q99619 263 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 ACPTQ9BZG2 426 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 LRTM1Q9HBL6 345 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 SAR1AQ9NR31 198 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 NOP53Q9NZM5 478 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 EIF3LQ9Y262 564 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 PTRH2Q9Y3E5 179 aaKnown RBP14.65□□□□□ -0.06
SS18-216ENST00000580751 SCN3AQ9NY46 2000 aa14.65□□□□□ -0.06
SS18-216ENST00000580751 ATP6AP2A0A1C7CYW4 349 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 PSMD12O00232 456 aaPredicted RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 RTCAO00442 366 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 FCHO1O14526 889 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 EFSO43281 561 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 CHST10O43529 356 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 CNOT3O75175 753 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 ATP6AP2O75787 350 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 CYC1P08574 325 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 PRPS2P11908 318 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 RNH1P13489 461 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 JAK1P23458 1154 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 ATP5A1P25705 553 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 ITPKBP27987 946 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 STX1BP61266 288 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 RPS18P62269 152 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 OLR1P78380 273 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 SQLEQ14534 574 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 KIAA0040Q15053 153 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 VWA2Q5GFL6 755 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 GALNT18Q6P9A2 607 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 PAGE2Q7Z2X7 111 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 ZC3H7AQ8IWR0 971 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 CA13Q8N1Q1 262 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 FITM2Q8N6M3 262 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 ACOT4Q8N9L9 421 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 OR2T11Q8NH01 316 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 TBC1D20Q96BZ9 403 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 FCRL1Q96LA6 429 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 MRPL1Q9BYD6 325 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 NMUR2Q9GZQ4 415 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 ZNF385DQ9H6B1 395 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 LYRM4Q9HD34 91 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 ADAM29Q9UKF5 820 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 MAPRE3Q9UPY8 281 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 WBP11Q9Y2W2 641 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 MRPS18BQ9Y676 258 aaKnown RBP14.64□□□□□ -0.07
SS18-216ENST00000580751 SPACA6W5XKT8 324 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 CFAP47Q6ZTR5 3102 aa14.64□□□□□ -0.07
SS18-216ENST00000580751 E9PBE3 544 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 KLHL41O60662 606 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 HNRNPCL1O60812 293 aaKnown RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 PEX11AO75192 247 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 ATP5HO75947 161 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 MYO1DO94832 1006 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 BMP10O95393 424 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 FHP07954 510 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 NCF2P19878 526 aaPredicted RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 PRDX6P30041 224 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 BSGP35613 385 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 GSTM5P46439 218 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 KLC1Q07866 573 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 ZSCAN26Q16670 478 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 ST3GAL2Q16842 350 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 FAM219BQ5XKK7 198 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 ZNF793Q6ZN11 406 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 RAB43Q86YS6 212 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 METTL4Q8N3J2 472 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 FNDC5Q8NAU1 212 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 TSPEARQ8WU66 669 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 NACC2Q96BF6 587 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 C11orf24Q96F05 449 aaPredicted RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 PEX11GQ96HA9 241 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 CRB3Q9BUF7 120 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms