RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NUDT13Q86X67 352 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 TMEM151BQ8IW70 566 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 CA13Q8N1Q1 262 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 METTL4Q8N3J2 472 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 DTWD1Q8N5C7 304 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 FDCSPQ8NFU4 85 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 MIEF2Q96C03 454 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 FER1L6-AS2Q96M78 137 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 KCNA7Q96RP8 456 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 OR51B5Q9H339 312 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 PFDN4Q9NQP4 134 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 SEMA3GQ9NS98 782 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 FARSBQ9NSD9 589 aaKnown RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 MS4A12Q9NXJ0 267 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 TRPC4Q9UBN4 977 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 VPS29Q9UBQ0 182 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 CTSFQ9UBX1 484 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 DAPP1Q9UN19 280 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 G3BP2Q9UN86 482 aaKnown RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 RAP2CQ9Y3L5 183 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ZNF451Q9Y4E5 1061 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 PCDHGB7Q9Y5F8 929 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 USP9XQ93008 2570 aaPredicted RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 CROCCQ5TZA2 2017 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 WDR91A4D1P6 747 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ANKRD33BA6NCL7 494 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SLC28A1O00337 649 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 CHST10O43529 356 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SNNO75324 88 aaPredicted RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 RSL1D1O76021 490 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 HSPA4LO95757 839 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 CHRNGP07510 517 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 FHP07954 510 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 RNH1P13489 461 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 BGNP21810 368 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 JAK1P23458 1154 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ARRB2P32121 409 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 BSGP35613 385 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SSR2P43308 183 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 XCR1P46094 333 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 GSTM5P46439 218 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SLC1A6P48664 564 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 RAB38P57729 211 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 FOXK1P85037 733 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 BST1Q10588 318 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 TBL3Q12788 808 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 STX3Q13277 289 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 UGT3A2Q3SY77 523 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 TUBB8Q3ZCM7 444 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SPIN4Q56A73 249 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 TCHHL1Q5QJ38 904 aaPredicted RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 DCAF10Q5QP82 559 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SH2D4BQ5SQS7 431 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 GALNT18Q6P9A2 607 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ZNF793Q6ZN11 406 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 QSOX2Q6ZRP7 698 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 PPP1R32Q7Z5V6 425 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ZC3H7AQ8IWR0 971 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 RNF175Q8N4F7 328 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 METTL27Q8N6F8 245 aaPredicted RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 ARFGAP2Q8N6H7 521 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ACOT4Q8N9L9 421 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 PLPP5Q8NEB5 264 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 FAM76AQ8TAV0 307 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 TBC1D20Q96BZ9 403 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 MTFMTQ96DP5 389 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 C11orf24Q96F05 449 aaPredicted RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 VPS50Q96JG6 964 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 NUDT9Q9BW91 350 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ACPTQ9BZG2 426 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 ILKAPQ9H0C8 392 aaPredicted RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 TNFRSF12AQ9NP84 129 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 PRDM9Q9NQV7 894 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 THAP1Q9NVV9 213 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 LYARQ9NX58 379 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 P4HTMQ9NXG6 502 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 GPR83Q9NYM4 423 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 KCMF1Q9P0J7 381 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 PHF11Q9UIL8 331 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SLC12A4Q9UP95 1085 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 MRPS33Q9Y291 106 aaKnown RBP9.31□□□□□ -0.92
GGA3-209ENST00000580646 TRAF6Q9Y4K3 522 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 TIMM22Q9Y584 194 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 DNAJC15Q9Y5T4 150 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 SPACA6W5XKT8 324 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 DOCK10Q96BY6 2186 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
GGA3-209ENST00000580646 MED13Q9UHV7 2174 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 A0A0A6YYD5 115 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 ZNF860A6NHJ4 632 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 PSMD12O00232 456 aaPredicted RBP9.3□□□□□ -0.92
GGA3-209ENST00000580646 RGS14O43566 566 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 DPM1O60762 260 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 CHN1P15882 459 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 MMP11P24347 488 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 CERS1P27544 350 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 HTR6P50406 440 aa9.3□□□□□ -0.92
GGA3-209ENST00000580646 RPL14P50914 215 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms