RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 GSTA1P08263 222 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 TAC1P20366 129 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 CLCN2P51788 898 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 RPS13P62277 151 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 TRAF3Q13114 568 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 BIKQ13323 160 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 MRPL49Q13405 166 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 TUBA3CQ13748 450 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 SERTAD2Q14140 314 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 ELOAQ14241 798 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 ZRSR2Q15696 482 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 ELAVL1Q15717 326 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 ZNF324BQ6AW86 544 aaPredicted RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 TUBA3EQ6PEY2 450 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 GSPT2Q8IYD1 628 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 TMEM132CQ8N3T6 1108 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 APCDD1LQ8NCL9 501 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 MYRIPQ8NFW9 859 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 OR52B6Q8NGF0 335 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 DNAJB8Q8NHS0 232 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 VMP1Q96GC9 406 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 SLX1AQ9BQ83 275 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 UTP23Q9BRU9 249 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 CDCP1Q9H5V8 836 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 ZBTB26Q9HCK0 441 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 PNO1Q9NRX1 252 aaKnown RBP13.87□□□□□ -0.19
SS18-212ENST00000579061 VTI1BQ9UEU0 232 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 PHF11Q9UIL8 331 aa13.87□□□□□ -0.19
SS18-212ENST00000579061 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 PLPP1O14494 284 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 SH3BGRLO75368 114 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 MYO1DO94832 1006 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 SEMA3DO95025 777 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 OTCP00480 354 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 F10P00742 488 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 CPN2P22792 545 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 CD96P40200 585 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 GPR143P51810 404 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 MLF1P58340 268 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 STX4Q12846 297 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 SLAMF1Q13291 335 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 RASA2Q15283 850 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 EIF2S3LQ2VIR3 472 aaKnown RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 ZNF766Q5HY98 468 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 FRG2Q64ET8 278 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 MILR1Q7Z6M3 343 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 RNF175Q8N4F7 328 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 KIF2BQ8N4N8 673 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 ZNF483Q8TF39 744 aaPredicted RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 MZB1Q8WU39 189 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 DAZLQ92904 295 aaKnown RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 NSUN5Q96P11 429 aaKnown RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 FRG2BQ96QU4 278 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 SERPINI1Q99574 410 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 DEFB126Q9BYW3 111 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 DDX31Q9H8H2 851 aaKnown RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 TRIM45Q9H8W5 580 aaPredicted RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 LYARQ9NX58 379 aaKnown RBP13.86□□□□□ -0.19
SS18-212ENST00000579061 TMEM216Q9P0N5 145 aa13.86□□□□□ -0.19
SS18-212ENST00000579061 SAP18O00422 153 aaKnown RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 FCHO1O14526 889 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 MAN1A2O60476 641 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 RASAL1O95294 804 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 CRYABP02511 175 aaKnown RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 PPP2R1BP30154 601 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 TLX1P31314 330 aaPredicted RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 TRHRP34981 398 aaPredicted RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 BSGP35613 385 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 ARL1P40616 181 aaPredicted RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 HERVK_113P63132 956 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 IGLV3-21P80748 117 aaPredicted RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 OR1C1Q15619 314 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 MRM1Q6IN84 353 aaKnown RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 CLNKQ7Z7G1 428 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 GPR180Q86V85 440 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 TDRPQ86YL5 185 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 MORN4Q8NDC4 146 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 OR14A16Q8NHC5 309 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 TANKQ92844 425 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 SCMH1Q96GD3 660 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 CDK15Q96Q40 435 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 TAAR6Q96RI8 345 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 ERVK-6Q9BXR3 956 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 ZNF717Q9BY31 904 aaPredicted RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 SEMA4BQ9NPR2 832 aaPredicted RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 OLAHQ9NV23 265 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 DCDC2Q9UHG0 476 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 FBXW2Q9UKT8 454 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 CLCA3PQ9Y6N3 262 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 HECTD1Q9ULT8 2610 aa13.85□□□□□ -0.19
SS18-212ENST00000579061 SPTBN1Q01082 2364 aaKnown RBP13.85□□□□□ -0.19
SS18-212ENST00000579061 A0A0A6YYD5 115 aa13.84□□□□□ -0.19
SS18-212ENST00000579061 TRBV11-1A0A0K0K1C0 115 aa13.84□□□□□ -0.19
SS18-212ENST00000579061 LDB3O75112 727 aa13.84□□□□□ -0.19
SS18-212ENST00000579061 AGFG2O95081 481 aa13.84□□□□□ -0.19
SS18-212ENST00000579061 ETHE1O95571 254 aa13.84□□□□□ -0.19
SS18-212ENST00000579061 IFNA16P05015 189 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms