RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 KCTD4Q8WVF5 259 aa14.79□□□□□ -0.04
CRLF3-203ENST00000578692 DAZLQ92904 295 aaKnown RBP14.79□□□□□ -0.04
CRLF3-203ENST00000578692 CMTM7Q96FZ5 175 aa14.79□□□□□ -0.04
CRLF3-203ENST00000578692 ZDHHC18Q9NUE0 388 aa14.79□□□□□ -0.04
CRLF3-203ENST00000578692 TINAGQ9UJW2 476 aa14.79□□□□□ -0.04
CRLF3-203ENST00000578692 KLF2Q9Y5W3 355 aaPredicted RBP14.79□□□□□ -0.04
CRLF3-203ENST00000578692 ARHGAP10A1A4S6 786 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 RTCAO00442 366 aaKnown RBP14.78□□□□□ -0.04
CRLF3-203ENST00000578692 PEX1O43933 1283 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 PRKNO60260 465 aaPredicted RBP14.78□□□□□ -0.04
CRLF3-203ENST00000578692 LDB3O75112 727 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 ABOP16442 354 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 TNNI3P19429 210 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 SERPINB1P30740 379 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 MEOX1P50221 254 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 SSR4P51571 173 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 IRF9Q00978 393 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 SERTAD2Q14140 314 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 ACAP2Q15057 778 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 GRHL2Q6ISB3 625 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 XKRXQ6PP77 449 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 CENPLQ8N0S6 344 aaPredicted RBP14.78□□□□□ -0.04
CRLF3-203ENST00000578692 TEX9Q8N6V9 391 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 MORN4Q8NDC4 146 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 PTPMT1Q8WUK0 201 aaPredicted RBP14.78□□□□□ -0.04
CRLF3-203ENST00000578692 MARVELD3Q96A59 401 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 LIN28AQ9H9Z2 209 aaKnown RBP14.78□□□□□ -0.04
CRLF3-203ENST00000578692 ADGRE2Q9UHX3 823 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 ANGPTL3Q9Y5C1 460 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 SPACA6W5XKT8 324 aa14.78□□□□□ -0.04
CRLF3-203ENST00000578692 CCDC189A1A4V9 331 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 HMX2A2RU54 273 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 TMEM200CA6NKL6 621 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 SAP18O00422 153 aaKnown RBP14.77□□□□□ -0.04
CRLF3-203ENST00000578692 ZNHIT1O43257 154 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 HIST1H1TP22492 207 aaPredicted RBP14.77□□□□□ -0.04
CRLF3-203ENST00000578692 CPN2P22792 545 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 PHBP35232 272 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 SSR2P43308 183 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 ADORA2A-AS1P86434 159 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 HSF1Q00613 529 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 UAP1Q16222 522 aaPredicted RBP14.77□□□□□ -0.04
CRLF3-203ENST00000578692 DEPDC1Q5TB30 811 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 KHDRBS2Q5VWX1 349 aaKnown RBP14.77□□□□□ -0.04
CRLF3-203ENST00000578692 OR4C11Q6IEV9 310 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 HSDL2Q6YN16 418 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 C16orf47Q6ZP98 133 aaPredicted RBP14.77□□□□□ -0.04
CRLF3-203ENST00000578692 MDGA2Q7Z553 956 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 C7orf57Q8NEG2 295 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 OR14A16Q8NHC5 309 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 C16orf52Q8NHV5 167 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 OR51B5Q9H339 312 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 SNX15Q9NRS6 342 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 MYOTQ9UBF9 498 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 ERVK-11Q9UQG0 969 aa14.77□□□□□ -0.04
CRLF3-203ENST00000578692 UNC79Q9P2D8 2635 aa14.77□□□□□ -0.05
CRLF3-203ENST00000578692 A0A096LPK6 155 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 OR2J2O76002 312 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 URI1O94763 535 aaPredicted RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 SCELO95171 688 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 KLHL2O95198 593 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 GFAPP14136 432 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 GRNP28799 593 aaKnown RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 TYK2P29597 1187 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 SMSP52788 366 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 DDX39BQ13838 428 aaKnown RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 NAA30Q147X3 362 aaPredicted RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 SETDB1Q15047 1291 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 PFKFB4Q16877 469 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 LIPJQ5W064 366 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 IL20RBQ6UXL0 311 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 BNC2Q6ZN30 1099 aaPredicted RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 MYLK4Q86YV6 388 aaPredicted RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 TICAM1Q8IUC6 712 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 RNF175Q8N4F7 328 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 HUS1BQ8NHY5 278 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 RGMAQ96B86 450 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 ANKRD9Q96BM1 317 aaPredicted RBP14.76□□□□□ -0.05
CRLF3-203ENST00000578692 OR8D2Q9GZM6 311 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 RUBCNLQ9H714 662 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 TIMMDC1Q9NPL8 285 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 MEMO1Q9Y316 297 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 TSC22D4Q9Y3Q8 395 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 PCDHGA11Q9Y5H2 935 aa14.76□□□□□ -0.05
CRLF3-203ENST00000578692 GTF3C1Q12789 2109 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 A8MVJ9 347 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 C17orf105B2RV13 164 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 WWP2O00308 870 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 TFECO14948 347 aaPredicted RBP14.75□□□□□ -0.05
CRLF3-203ENST00000578692 KLK8O60259 260 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 AGAP20933 346 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 HTR1EP28566 365 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 RFC3P40938 356 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 PIK3CBP42338 1070 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 RAP1GDS1P52306 607 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 ALDH18A1P54886 795 aaKnown RBP14.75□□□□□ -0.05
CRLF3-203ENST00000578692 GPR85P60893 370 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 ID2Q02363 134 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 SLAMF1Q13291 335 aa14.75□□□□□ -0.05
CRLF3-203ENST00000578692 PCBP2Q15366 365 aaKnown RBP eCLIP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms